RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 PDZD2O15018 2839 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 ESYT3A0FGR9 886 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 NPIPA2E9PIF3 369 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 NPIPA3F8WFD2 350 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 G3V3Y1 287 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 C19orf84I3L1E1 186 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 FOXE1O00358 373 aaPredicted RBP12.13□□□□□ -0.47
RTN3-212ENST00000543123 PROM1O43490 865 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 KLK8O60259 260 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 SUSD5O60279 629 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 SEMA3DO95025 777 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 CLDN9O95484 217 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 GPR75O95800 540 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 IGHG3P01860 377 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 INHBAP08476 426 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 ACVR2AP27037 513 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 GALNSP34059 522 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 GMPRP36959 345 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 RPS13P62277 151 aaKnown RBP12.13□□□□□ -0.47
RTN3-212ENST00000543123 KCNJ2P63252 427 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 CDSNQ15517 529 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 CPSF6Q16630 551 aaKnown RBP eCLIP12.13□□□□□ -0.47
RTN3-212ENST00000543123 HYAL4Q2M3T9 481 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 SPRED3Q2MJR0 410 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 ZNF750Q32MQ0 723 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 C6orf163Q5TEZ5 329 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 SLC22A10Q63ZE4 541 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 RNF111Q6ZNA4 994 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 OR4N5Q8IXE1 308 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 L3MBTL4Q8NA19 623 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
RTN3-212ENST00000543123 RIT1Q92963 219 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 ATP6V1E2Q96A05 226 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 SARAFQ96BY9 339 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 SPACA9Q96E40 222 aaPredicted RBP12.13□□□□□ -0.47
RTN3-212ENST00000543123 SERPINI1Q99574 410 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 CNPPD1Q9BV87 410 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 SORBS1Q9BX66 1292 aaKnown RBP12.13□□□□□ -0.47
RTN3-212ENST00000543123 ENKD1Q9H0I2 346 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 ACSS3Q9H6R3 686 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 DDX31Q9H8H2 851 aaKnown RBP12.13□□□□□ -0.47
RTN3-212ENST00000543123 KCNJ16Q9NPI9 418 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 CNIH4Q9P003 139 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 B4GALT7Q9UBV7 327 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 ATG4BQ9Y4P1 393 aa12.13□□□□□ -0.47
RTN3-212ENST00000543123 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■□□□□ 10.1
RTN3-212ENST00000543123 AKAP9Q99996 3911 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 A0A0A6YYD5 115 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 A0A0G2JMM0 328 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 A0A1W2PPB8 328 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 A0A1W2PRS3 328 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 PINLYPA6NC86 204 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 KIR3DP1A8MWS1 328 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 CAPN14A8MX76 684 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 AQP7O14520 342 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 HCN1O60741 890 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 WDR1O75083 606 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 SMIM24O75264 130 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 ALDOAP04075 364 aaKnown RBP12.12□□□□□ -0.47
RTN3-212ENST00000543123 HOXD4P09016 255 aaPredicted RBP12.12□□□□□ -0.47
RTN3-212ENST00000543123 RBP1P09455 135 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 FAM58BPP0C7Q3 252 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 CCL3P10147 92 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 SERPINB3P29508 390 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 MAGEA5P43359 124 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 KIR3DL1P43629 444 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 MAN2A2P49641 1150 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 HNRNPH2P55795 449 aaKnown RBP12.12□□□□□ -0.47
RTN3-212ENST00000543123 HERVK_113P63132 956 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 ERVK-8P63133 956 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 SLC7A5Q01650 507 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 SLC10A1Q14973 349 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 TRADDQ15628 312 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 C18orf63Q68DL7 685 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 OR52E8Q6IFG1 317 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 B3GNT6Q6ZMB0 384 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 TRILQ7L0X0 811 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 PAGE2Q7Z2X7 111 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 GOLGA7Q7Z5G4 137 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 C9orf40Q8IXQ3 194 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 ZNF295-AS1Q8N0V1 137 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 TAGAPQ8N103 731 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 TMEM251Q8N6I4 163 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 ACBD4Q8NC06 268 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 FAM13CQ8NE31 585 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 LILRB4Q8NHJ6 448 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 PAQR8Q8TEZ7 354 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 PPWD1Q96BP3 646 aaKnown RBP12.12□□□□□ -0.47
RTN3-212ENST00000543123 GAL3ST4Q96RP7 486 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 ERVK-6Q9BXR3 956 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 VPS11Q9H270 941 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 LDAHQ9H6V9 325 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 EXO5Q9H790 373 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 ZDHHC18Q9NUE0 388 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 AHSPQ9NZD4 102 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 ERVK-19Q9WJR5 959 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 RNF6Q9Y252 685 aa12.12□□□□□ -0.47
RTN3-212ENST00000543123 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.12□□□□□ -0.47
RTN3-212ENST00000543123 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms