RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CYHR1Q6ZMK1 362 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 SPATC1Q76KD6 591 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 ZNF563Q8TA94 476 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 WFIKKN2Q8TEU8 576 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 UFD1Q92890 307 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 OMA1Q96E52 524 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 NLGN3Q9NZ94 848 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 POLR1DQ9Y2S0 133 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 A0A075B6Q4 140 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 SAGE2PA6NJ88 616 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 CCRL2O00421 344 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 NOS1APO75052 506 aaPredicted RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 CA3P07451 260 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 HOXB2P14652 356 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 MRPL58Q14197 206 aaKnown RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 ZNF234Q14588 700 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 TRIM71Q2Q1W2 868 aaKnown RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 TBC1D25Q3MII6 688 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 AMZ1Q400G9 498 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 SPATS1Q496A3 300 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 GALNT12Q8IXK2 581 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 B3GNT7Q8NFL0 401 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 POP5Q969H6 163 aaKnown RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 PDLIM5Q96HC4 596 aaKnown RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 SH3YL1Q96HL8 342 aaPredicted RBP15.35■□□□□ 0.05
VARS2-212ENST00000542001 ZSWIM3Q96MP5 696 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 MKL2Q9ULH7 1088 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 PCM1Q15154 2024 aa15.35■□□□□ 0.05
VARS2-212ENST00000542001 DYRK3O43781 588 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 IGLV3-27P01718 113 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 GAB1Q13480 694 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 MLIPQ5VWP3 458 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 SLC30A6Q6NXT4 461 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 NRTNQ99748 197 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 NIPSNAP1Q9BPW8 284 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 SLC30A2Q9BRI3 323 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 RACGAP1Q9H0H5 632 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 CDH7Q9ULB5 785 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 FGF19O95750 216 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 CD72P21854 359 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 ALDH3B2P48448 385 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 CAV3P56539 151 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 MZT2AQ6P582 158 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 FRRS1Q6ZNA5 592 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 DCDC5Q6ZRR9 648 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 OR52N2Q8NGI0 321 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 TRUB1Q8WWH5 349 aaKnown RBP15.34■□□□□ 0.05
VARS2-212ENST00000542001 SP140LQ9H930 580 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 TRPV5Q9NQA5 729 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 FAM183AA6NL82 134 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 KMOO15229 486 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 STX11O75558 287 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 ETHE1O95571 254 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 UQCRC2P22695 453 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 AHCYP23526 432 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 SLC19A1P41440 591 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 RTL4Q6ZR62 310 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 OR4C6Q8NH72 309 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 KCTD7Q96MP8 289 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 BRD7Q9NPI1 651 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 DMRT3Q9NQL9 472 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 ENPP4Q9Y6X5 453 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 LRRC37AA6NMS7 1700 aa15.34■□□□□ 0.05
VARS2-212ENST00000542001 CD8B2A6NJW9 211 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 ENTPD6O75354 484 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 REM1O75628 298 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 IGFBP1P08833 259 aaPredicted RBP15.33■□□□□ 0.05
VARS2-212ENST00000542001 PRKAR1AP10644 381 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 CD8BP10966 210 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 PFN3P60673 137 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 FAM26DQ5JW98 314 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 FAAH2Q6GMR7 532 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 CYB561A3Q8NBI2 242 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 RASSF5Q8WWW0 418 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 AP3S1Q92572 193 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 ECHDC3Q96DC8 303 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 FAM46AQ96IP4 442 aaKnown RBP15.33■□□□□ 0.05
VARS2-212ENST00000542001 RAD9AQ99638 391 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 MAPKAP1Q9BPZ7 522 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 TUBA1CQ9BQE3 449 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 NEUROD4Q9HD90 331 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 CLDND1Q9NY35 253 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 HCFC2Q9Y5Z7 792 aa15.33■□□□□ 0.05
VARS2-212ENST00000542001 H3BNC9 293 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 MPZL2O60487 215 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 ZNF821O75541 412 aaPredicted RBP15.33■□□□□ 0.04
VARS2-212ENST00000542001 HOXB6P17509 224 aaKnown RBP15.33■□□□□ 0.04
VARS2-212ENST00000542001 PHC1P78364 1004 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 RELAQ04206 551 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 ZNF691Q5VV52 312 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 RBM45Q8IUH3 476 aaKnown RBP15.33■□□□□ 0.04
VARS2-212ENST00000542001 KLHDC8AQ8IYD2 350 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 CKAP5Q14008 2032 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 SMAD9O15198 467 aaKnown RBP15.33■□□□□ 0.04
VARS2-212ENST00000542001 ZDHHC11BP0C7U3 371 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 CCR2P41597 374 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 PRRT3Q5FWE3 981 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 CCNJQ5T5M9 372 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 ZNF655Q8N720 491 aaPredicted RBP15.33■□□□□ 0.04
VARS2-212ENST00000542001 TMEM80Q96HE8 168 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms