RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	STT3A	P46977	705 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	TNFAIP8L3	Q5GJ75	292 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	SH2D4B	Q5SQS7	431 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	HHAT	Q5VTY9	493 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959		Q6ZS92	163 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	ATCAY	Q86WG3	371 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	RPS19BP1	Q86WX3	136 aa	Known RBP	18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	DDIAS	Q8IXT1	998 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	MMP21	Q8N119	569 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	C7orf57	Q8NEG2	295 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	OR1N1	Q8NGS0	311 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	PTPMT1	Q8WUK0	201 aa	Predicted RBP	18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	FAIM2	Q9BWQ8	316 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	ANKRD10	Q9NXR5	420 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	PTGDR2	Q9Y5Y4	395 aa		18.31	■□□□□ 0.52
ARF3-208	ENST00000541959	GABRR3	A8MPY1	467 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	TMEM233	B4DJY2	109 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	MAN1A2	O60476	641 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	ERAL1	O75616	437 aa	Known RBP	18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	HSPA4L	O95757	839 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	TIA1	P31483	386 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	IGLV3-21	P80748	117 aa	Predicted RBP	18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	OC90	Q02509	493 aa	Predicted RBP	18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	BIK	Q13323	160 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	ZNF169	Q14929	603 aa	Predicted RBP	18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	TLR1	Q15399	786 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	CHI3L2	Q15782	390 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	H3F3C	Q6NXT2	135 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	APCDD1L	Q8NCL9	501 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	MORN4	Q8NDC4	146 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	OR4K14	Q8NGD5	310 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	SUN3	Q8TAQ9	357 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	SLC2A12	Q8TD20	617 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	MGARP	Q8TDB4	240 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	TM4SF18	Q96CE8	201 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	NPAS2	Q99743	824 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	PELO	Q9BRX2	385 aa	Known RBP	18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	CNPPD1	Q9BV87	410 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	TMBIM4	Q9HC24	238 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	PFDN4	Q9NQP4	134 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	COPS7A	Q9UBW8	275 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	TRAF6	Q9Y4K3	522 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	PCDHA9	Q9Y5H5	950 aa		18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	USP9X	Q93008	2570 aa	Predicted RBP	18.3	■□□□□ 0.52
ARF3-208	ENST00000541959	C1orf226	A1L170	272 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	SERTM1	A2A2V5	107 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	OR5H15	A6NDH6	313 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	SLC28A1	O00337	649 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	RGS14	O43566	566 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	IL3	P08700	152 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	ANXA4	P09525	319 aa	Predicted RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	SERPINB5	P36952	375 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	MAGOH	P61326	146 aa	Known RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	TRA2B	P62995	288 aa	Known RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	RAE1	P78406	368 aa	Known RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	NR6A1	Q15406	480 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	INPP5J	Q15735	1006 aa	Predicted RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	PRR30	Q53SZ7	412 aa	Predicted RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	C6orf163	Q5TEZ5	329 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	KANK2	Q63ZY3	851 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	ST13P4	Q8IZP2	240 aa	Predicted RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	CISD2	Q8N5K1	135 aa	Known RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	ZNF321P	Q8N8H1	164 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	HAS2	Q92819	552 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	KLHL29	Q96CT2	875 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	UTP23	Q9BRU9	249 aa	Known RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	DLGAP4	Q9Y2H0	992 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	POLR3H	Q9Y535	204 aa	Predicted RBP	18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	SVIL	O95425	2214 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	COL12A1	Q99715	3063 aa		18.29	■□□□□ 0.52
ARF3-208	ENST00000541959	TRAV17	A0A0B4J275	112 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959		A0A1W2PS29	197 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	FCHO1	O14526	889 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	VPS4B	O75351	444 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	SEC22B	O75396	215 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	LYPLA1	O75608	230 aa	Predicted RBP	18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	RSL1D1	O76021	490 aa	Known RBP	18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	ZFAND5	O76080	213 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	SERPINE1	P05121	402 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	LINC00032	P0C843	101 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	XK	P51811	444 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	MPP2	Q14168	576 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	ZNF267	Q14586	743 aa	Predicted RBP	18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	HSDL2	Q6YN16	418 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	DGAT2L6	Q6ZPD8	337 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	TRIM46	Q7Z4K8	759 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	CLYBL	Q8N0X4	340 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	C16orf78	Q8WTQ4	265 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	TWIST2	Q8WVJ9	160 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	ART5	Q96L15	291 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	LIN28A	Q9H9Z2	209 aa	Known RBP	18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	ZNF223	Q9UK11	482 aa	Predicted RBP	18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	VPS4A	Q9UN37	437 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	HIVEP3	Q5T1R4	2406 aa		18.28	■□□□□ 0.52
ARF3-208	ENST00000541959	CROCC	Q5TZA2	2017 aa		18.27	■□□□□ 0.52
ARF3-208	ENST00000541959	TMEM120B	A0PK00	339 aa		18.27	■□□□□ 0.52
ARF3-208	ENST00000541959	BIRC5	O15392	142 aa		18.27	■□□□□ 0.52
ARF3-208	ENST00000541959	PRKN	O60260	465 aa	Predicted RBP	18.27	■□□□□ 0.52
ARF3-208	ENST00000541959	SKAP2	O75563	359 aa	Predicted RBP	18.27	■□□□□ 0.52
ARF3-208	ENST00000541959	DDAH2	O95865	285 aa		18.27	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms