RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 DEFB108AA8MXU0 73 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 GPRIN2O60269 458 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 SUSD5O60279 629 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 CCDC22O60826 627 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 B4GALT2O60909 372 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 OR6B1O95007 311 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 FKBP9O95302 570 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 NSA2O95478 260 aaKnown RBP8.99□□□□□ -0.97
CHFR-220ENST00000541817 CRTAMO95727 393 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 B3GALT4O96024 378 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 IL2RAP01589 272 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 C1QAP02745 245 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 EGR1P18146 543 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 PSMB4P28070 264 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 NPY2RP49146 381 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 SSR4P51571 173 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 OLR1P78380 273 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 BMPR2Q13873 1038 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 KRT72Q14CN4 511 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 CHI3L2Q15782 390 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 NDUFA9Q16795 377 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 XKR6Q5GH73 641 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 GRTP1Q5TC63 336 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 MROH9Q5TGP6 573 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 HIST2H2BDQ6DRA6 164 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 PLXDC2Q6UX71 529 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 IL17RELQ6ZVW7 336 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 ADCK2Q7Z695 626 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 MTDHQ86UE4 582 aaKnown RBP8.99□□□□□ -0.97
CHFR-220ENST00000541817 PDSS2Q86YH6 399 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 ARHGAP24Q8N264 748 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 MEIOBQ8N635 442 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 GIMAP7Q8NHV1 300 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 LCORQ96JN0 433 aaPredicted RBP8.99□□□□□ -0.97
CHFR-220ENST00000541817 C7orf26Q96N11 449 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 VAT1Q99536 393 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 SIKE1Q9BRV8 207 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 BEX2Q9BXY8 128 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 C12orf65Q9H3J6 166 aaKnown RBP8.99□□□□□ -0.97
CHFR-220ENST00000541817 LRRC40Q9H9A6 602 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 HPF1Q9NWY4 346 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 NOP53Q9NZM5 478 aaKnown RBP8.99□□□□□ -0.97
CHFR-220ENST00000541817 BFARQ9NZS9 450 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 TRIM33Q9UPN9 1127 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 FREM3P0C091 2139 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 PKD1L1Q8TDX9 2849 aa8.99□□□□□ -0.97
CHFR-220ENST00000541817 SAGE2PA6NJ88 616 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 CDK2AP1O14519 115 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 SNPHO15079 494 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 C1orf105O95561 183 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 EPPINO95925 133 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 RPN2P04844 631 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 BPGMP07738 259 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 RFPL3SP0C7P2 107 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 OR56A5P0C7T3 313 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 CNR1P21554 472 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 SPRP35270 261 aaPredicted RBP8.98□□□□□ -0.97
CHFR-220ENST00000541817 SOX18P35713 384 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 GRIA1P42261 906 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 ADARP55265 1226 aaKnown RBP8.98□□□□□ -0.97
CHFR-220ENST00000541817 ACSF3Q4G176 576 aaPredicted RBP8.98□□□□□ -0.97
CHFR-220ENST00000541817 NDUFAF5Q5TEU4 345 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 TTC23LQ6PF05 361 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 TRMT10BQ6PF06 316 aaKnown RBP8.98□□□□□ -0.97
CHFR-220ENST00000541817 RANBP10Q6VN20 620 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 PACS1Q6VY07 963 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 CLNKQ7Z7G1 428 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 KCT2Q8NC54 265 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 PPFIBP2Q8ND30 876 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 OR6P1Q8NGX9 317 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 SLC22A8Q8TCC7 542 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 SKA2Q8WVK7 121 aaPredicted RBP8.98□□□□□ -0.97
CHFR-220ENST00000541817 PTCHD1Q96NR3 888 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 CPNE1Q99829 537 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 IL1RL2Q9HB29 575 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.98□□□□□ -0.97
CHFR-220ENST00000541817 KLHL28Q9NXS3 571 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 TAC3Q9UHF0 121 aa8.98□□□□□ -0.97
CHFR-220ENST00000541817 ZNF223Q9UK11 482 aaPredicted RBP8.98□□□□□ -0.97
CHFR-220ENST00000541817 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.98□□□□□ -0.97
CHFR-220ENST00000541817 GPC4O75487 556 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 OR2J2O76002 312 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 CYC1P08574 325 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 T-ENOLP0DO92 83 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 MYL2P10916 166 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 MAOAP21397 527 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 CALB2P22676 271 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 ADRA1AP35348 466 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 GP5P40197 560 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 SOX3P41225 446 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 CPA2P48052 419 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 GEMP55040 296 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 MPP1Q00013 466 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 BST1Q10588 318 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 FOXO1Q12778 655 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 FOXF2Q12947 444 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 FRG1Q14331 258 aaKnown RBP8.97□□□□□ -0.97
CHFR-220ENST00000541817 CRYMQ14894 314 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 TBCCQ15814 346 aa8.97□□□□□ -0.97
CHFR-220ENST00000541817 FAM91A1Q658Y4 838 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms