RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 ZNF444Q8N0Y2 327 aaPredicted RBP3.37□□□□□ -1.87
RAP1B-224ENST00000541216 LINC00612Q8N6U2 182 aa3.37□□□□□ -1.87
RAP1B-224ENST00000541216 BANPQ8N9N5 519 aa3.37□□□□□ -1.87
RAP1B-224ENST00000541216 OR4Q3Q8NH05 313 aa3.37□□□□□ -1.87
RAP1B-224ENST00000541216 AP2M1Q96CW1 435 aa3.37□□□□□ -1.87
RAP1B-224ENST00000541216 LRRCC1Q9C099 1032 aa3.37□□□□□ -1.87
RAP1B-224ENST00000541216 RNPEPL1Q9HAU8 725 aa3.37□□□□□ -1.87
RAP1B-224ENST00000541216 FAM212BQ9NTI7 297 aaPredicted RBP3.37□□□□□ -1.87
RAP1B-224ENST00000541216 OR1A2Q9Y585 309 aa3.37□□□□□ -1.87
RAP1B-224ENST00000541216 ROBO1Q9Y6N7 1651 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 TNS2Q63HR2 1409 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 EP400Q96L91 3159 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 AGRNO00468 2067 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 TMEM129A0AVI4 362 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 ZNF840PA6NDX5 716 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 CCSO14618 274 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 EPOP01588 193 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 IGHG3P01860 377 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 MELTFP08582 738 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 ATP5DP30049 168 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 SLC1A4P43007 532 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 TNFSF10P50591 281 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 PEX3P56589 373 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 LCP2Q13094 533 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 FASTKQ14296 549 aaKnown RBP3.36□□□□□ -1.87
RAP1B-224ENST00000541216 CCDC184Q52MB2 194 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 GLRA4Q5JXX5 417 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 AGAP7PQ5VUJ5 663 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 SNRNP48Q6IEG0 339 aaKnown RBP3.36□□□□□ -1.87
RAP1B-224ENST00000541216 Q6ZR54 194 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 NUFIP2Q7Z417 695 aaKnown RBP3.36□□□□□ -1.87
RAP1B-224ENST00000541216 CEACAM19Q7Z692 300 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 MARCH9Q86YJ5 346 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 HPS6Q86YV9 775 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 WDR49Q8IV35 697 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 SLC39A11Q8N1S5 342 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 RTL3Q8N8U3 475 aaKnown RBP3.36□□□□□ -1.87
RAP1B-224ENST00000541216 TRPV3Q8NET8 790 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 PCNPQ8WW12 178 aaKnown RBP3.36□□□□□ -1.87
RAP1B-224ENST00000541216 PRCCQ92733 491 aaPredicted RBP3.36□□□□□ -1.87
RAP1B-224ENST00000541216 PTP4A1Q93096 173 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 FAM46BQ96A09 425 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 RAB40CQ96S21 281 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 PSMB7Q99436 277 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 LIME1Q9H400 295 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 UBE2TQ9NPD8 197 aaPredicted RBP3.36□□□□□ -1.87
RAP1B-224ENST00000541216 PLEK2Q9NYT0 353 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 RARRES3Q9UL19 164 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 AUP1Q9Y679 476 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 ZNF142P52746 1687 aaPredicted RBP3.36□□□□□ -1.87
RAP1B-224ENST00000541216 RTEL1-TNFRSF6BF6WH68 1400 aa3.36□□□□□ -1.87
RAP1B-224ENST00000541216 NPHP4O75161 1426 aaPredicted RBP3.36□□□□□ -1.87
RAP1B-224ENST00000541216 KDM5CP41229 1560 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 UTRNP46939 3433 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 BCLAF3A2AJT9 711 aaKnown RBP3.35□□□□□ -1.87
RAP1B-224ENST00000541216 CSO75390 466 aaKnown RBP3.35□□□□□ -1.87
RAP1B-224ENST00000541216 STBD1O95210 358 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 VENTXO95231 258 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 CPNE6O95741 557 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 LYNP07948 512 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 NUDT17P0C025 328 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 UROSP10746 265 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 GPX3P22352 226 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 SLC1A6P48664 564 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 SERPINH1P50454 418 aaKnown RBP3.35□□□□□ -1.87
RAP1B-224ENST00000541216 STX1BP61266 288 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 RPL27P61353 136 aaKnown RBP3.35□□□□□ -1.87
RAP1B-224ENST00000541216 POU5F1Q01860 360 aaKnown RBP3.35□□□□□ -1.87
RAP1B-224ENST00000541216 MSLNQ13421 630 aaPredicted RBP3.35□□□□□ -1.87
RAP1B-224ENST00000541216 STXBP2Q15833 593 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 PCK2Q16822 640 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 EIPR1Q53HC9 387 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 SLC25A30Q5SVS4 291 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 PRAMEF8Q5VWM4 474 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 LEMD1Q68G75 181 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 EMBQ6PCB8 327 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 ZNF730Q6ZMV8 503 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 C17orf64Q86WR6 236 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 CCDC71Q8IV32 467 aaPredicted RBP3.35□□□□□ -1.87
RAP1B-224ENST00000541216 SPAG16Q8N0X2 631 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 ZNF781Q8N8C0 355 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 CLEC1AQ8NC01 280 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 BCL2L2Q92843 193 aaPredicted RBP3.35□□□□□ -1.87
RAP1B-224ENST00000541216 PNPLA2Q96AD5 504 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 ULK4Q96C45 1275 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 NTNG2Q96CW9 530 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 PCED1BQ96HM7 432 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 GUCD1Q96NT3 240 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 S1PR3Q99500 378 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 CXXC4Q9H2H0 198 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 MAGEF1Q9HAY2 307 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 IL1RAPL2Q9NP60 686 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 ZNF446Q9NWS9 450 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 SPG21Q9NZD8 308 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 ZNF581Q9P0T4 197 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.35□□□□□ -1.876e-8■□□□□ 11.2
RAP1B-224ENST00000541216 CNTLNQ9NXG0 1405 aa3.35□□□□□ -1.87
RAP1B-224ENST00000541216 CAMTA1Q9Y6Y1 1673 aa3.34□□□□□ -1.87
RAP1B-224ENST00000541216 A0A087WWV3 80 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms