RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 KRTAP24-1Q3LI83 254 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 ACSF3Q4G176 576 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 AARS2Q5JTZ9 985 aaKnown RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 NIPAL1Q6NVV3 410 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 AFTPHQ6ULP2 937 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 RTL4Q6ZR62 310 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 OTOAQ7RTW8 1153 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 ADCK2Q7Z695 626 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 PLD3Q8IV08 490 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 KRT222Q8N1A0 295 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 AFAP1L2Q8N4X5 818 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SYT8Q8NBV8 401 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 HIPK4Q8NE63 616 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 B3GNT7Q8NFL0 401 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 TNIP2Q8NFZ5 429 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SKA2Q8WVK7 121 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 KIAA1191Q96A73 305 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 TM4SF19Q96DZ7 209 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 HSPBAP1Q96EW2 488 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 CAPZA3Q96KX2 299 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SGCZQ96LD1 299 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 GBP4Q96PP9 640 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 PANX3Q96QZ0 392 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 CCDC77Q9BR77 488 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 AMBRA1Q9C0C7 1298 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 HSD3B7Q9H2F3 369 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 MS4A5Q9H3V2 200 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 EXO5Q9H790 373 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 CLK4Q9HAZ1 481 aaKnown RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 ACKR4Q9NPB9 350 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 FAM114A2Q9NRY5 505 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 TMEM184CQ9NVA4 438 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SPRR3Q9UBC9 169 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 NDRG3Q9UGV2 375 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 TAC3Q9UHF0 121 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 FBXW2Q9UKT8 454 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 RIMKLBQ9ULI2 386 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 NENFQ9UMX5 172 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 PPIEQ9UNP9 301 aaKnown RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 NAALAD2Q9Y3Q0 740 aa4.23□□□□□ -1.73
SNHG1-214ENST00000540865 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.23□□□□□ -1.733e-19■■■■■ 78.9
SNHG1-214ENST00000540865 PRKDCP78527 4128 aaKnown RBP4.23□□□□□ -1.73
SNHG1-214ENST00000540865 SCN2AQ99250 2005 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 SNRNP200O75643 2136 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 RYR3Q15413 4870 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 NOTCH1P46531 2555 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 MPDZO75970 2070 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CMYA5Q8N3K9 4069 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ABCA1O95477 2261 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 hCG_1818297A0A087WSY0 165 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CD8B2A6NJW9 211 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 E7ENX8 843 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 G3V3Y1 287 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 H7C0C1 242 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 APOC4-APOC2K7ER74 178 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CTIFO43310 598 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CHST10O43529 356 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CD5LO43866 347 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 GALR3O60755 368 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 B4GALT2O60909 372 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ERN1O75460 977 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 PSIP1O75475 530 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 OR2J2O76002 312 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 MYO1DO94832 1006 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 OR6B1O95007 311 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 MPIG6BO95866 241 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 APOC2P02655 101 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 SLC35G6P0C7Q6 338 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CTNNA2P26232 953 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 SDHAP31040 664 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ATP5OP48047 213 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 GPR143P51810 404 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ADARP55265 1226 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 IL2P60568 153 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 SKP1P63208 163 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 TAP2Q03519 686 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 TNK1Q13470 666 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 TSTA3Q13630 321 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 GBX1Q14549 363 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 PARP6Q2NL67 630 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 FASTKD1Q53R41 847 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 XKR6Q5GH73 641 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 PRR31Q5SQ13 230 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 NSUN5P2Q63ZY6 315 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 PTRHD1Q6GMV3 140 aaKnown RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 IL20RBQ6UXL0 311 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 FAM47EQ6ZV65 393 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 BBS12Q6ZW61 710 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF534Q76KX8 674 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ABHD13Q7L211 337 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 ASPGQ86U10 573 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 SLC26A11Q86WA9 606 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 LRRC6Q86X45 466 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 CDKL3Q8IVW4 592 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-214ENST00000540865 PM20D2Q8IYS1 436 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 LINC01356Q8N9X3 169 aa4.22□□□□□ -1.73
SNHG1-214ENST00000540865 PPHLN1Q8NEY8 458 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms