RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 CSNK2A2P19784 350 aaPredicted RBP23.12■■□□□ 1.29
TTC3-225ENST00000540756 KDELR2P33947 212 aa23.12■■□□□ 1.29
TTC3-225ENST00000540756 WLSQ5T9L3 541 aa23.12■■□□□ 1.29
TTC3-225ENST00000540756 ERICH5Q6P6B1 374 aa23.12■■□□□ 1.29
TTC3-225ENST00000540756 PLXDC1Q8IUK5 500 aa23.12■■□□□ 1.29
TTC3-225ENST00000540756 METTL27Q8N6F8 245 aaPredicted RBP23.12■■□□□ 1.29
TTC3-225ENST00000540756 ICA1LQ8NDH6 482 aa23.12■■□□□ 1.29
TTC3-225ENST00000540756 OR52E4Q8NGH9 312 aa23.12■■□□□ 1.29
TTC3-225ENST00000540756 ZNF285Q96NJ3 590 aa23.12■■□□□ 1.29
TTC3-225ENST00000540756 AGRPO00253 132 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 CKMT2P17540 419 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 CNR2P34972 360 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 GPLD1P80108 840 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 CEBPEQ15744 281 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 TMTC4Q5T4D3 741 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 GCNT6Q5T4J0 391 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 CEACAM20Q6UY09 585 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 NFKBIDQ8NI38 313 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 DOK4Q8TEW6 326 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 RAB8BQ92930 207 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 OTUB1Q96FW1 271 aaPredicted RBP23.11■■□□□ 1.29
TTC3-225ENST00000540756 CD180Q99467 661 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 ZNF184Q99676 751 aaPredicted RBP23.11■■□□□ 1.29
TTC3-225ENST00000540756 CIB1Q99828 191 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 RBCK1Q9BYM8 510 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 ANKHQ9HCJ1 492 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 ZNF780BQ9Y6R6 833 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 SEC16AO15027 2179 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 ZNF682O95780 498 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 CAPNS1P04632 268 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 PRIM2P49643 509 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 XKP51811 444 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 PRKAG1P54619 331 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 MAT1AQ00266 395 aaKnown RBP23.11■■□□□ 1.29
TTC3-225ENST00000540756 EEF1A2Q05639 463 aaKnown RBP23.11■■□□□ 1.29
TTC3-225ENST00000540756 FADDQ13158 208 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 TAF11Q15544 211 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 TCEAL6Q6IPX3 200 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 C11orf65Q8NCR3 313 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 KAT2AQ92830 837 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 TCEAL3Q969E4 200 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 COL26A1Q96A83 441 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 SLC47A1Q96FL8 570 aa23.11■■□□□ 1.29
TTC3-225ENST00000540756 GTPBP2Q9BX10 602 aaKnown RBP23.11■■□□□ 1.29
TTC3-225ENST00000540756 HYKKA2RU49 373 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 ARHGAP33O14559 1287 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 FASP25445 335 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 PCGF2P35227 344 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 MRPS35P82673 323 aaKnown RBP23.1■■□□□ 1.29
TTC3-225ENST00000540756 VAC14Q08AM6 782 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 VEZF1Q14119 521 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 NR0B2Q15466 257 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 SYT16Q17RD7 645 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 FAM98BQ52LJ0 330 aaKnown RBP23.1■■□□□ 1.29
TTC3-225ENST00000540756 PRAMEF17Q5VTA0 474 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 VTCN1Q7Z7D3 282 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 ZC3H7AQ8IWR0 971 aaKnown RBP23.1■■□□□ 1.29
TTC3-225ENST00000540756 SIMC1Q8NDZ2 872 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 ZNF570Q96NI8 536 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 SPATA9Q9BWV2 254 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 ASPSCR1Q9BZE9 553 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 ZCCHC3Q9NUD5 404 aaKnown RBP23.1■■□□□ 1.29
TTC3-225ENST00000540756 MS4A12Q9NXJ0 267 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 HCN3Q9P1Z3 774 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 SLC6A14Q9UN76 642 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 DTNAQ9Y4J8 743 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 CCDC88CQ9P219 2028 aa23.1■■□□□ 1.29
TTC3-225ENST00000540756 MN1Q10571 1320 aaPredicted RBP23.1■■□□□ 1.29
TTC3-225ENST00000540756 CHST10O43529 356 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 FGF17O60258 216 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 RAP2AP10114 183 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 TLX1P31314 330 aaPredicted RBP23.09■■□□□ 1.29
TTC3-225ENST00000540756 MPIP34949 423 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 MC3RP41968 323 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 FOLH1Q04609 750 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 CHRNB3Q05901 458 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 OR52E8Q6IFG1 317 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 SLC23A3Q6PIS1 610 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 ZNF574Q6ZN55 896 aaPredicted RBP23.09■■□□□ 1.29
TTC3-225ENST00000540756 GALNT4Q8N4A0 578 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 OR4K14Q8NGD5 310 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 OR5D16Q8NGK9 328 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 ZFP28Q8NHY6 868 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 EME1Q96AY2 570 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 YIPF4Q9BSR8 244 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 PSME2Q9UL46 239 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 CLCA2Q9UQC9 943 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 TMEM184BQ9Y519 407 aaPredicted RBP23.09■■□□□ 1.29
TTC3-225ENST00000540756 SAC3D1A6NKF1 404 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 FOLR1P15328 257 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 CCT8P50990 548 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 DSTNP60981 165 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 HSD11B2P80365 405 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 SCARB2Q14108 478 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 ZNF528Q3MIS6 628 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 TMEM126BQ8IUX1 230 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 CEP76Q8TAP6 659 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 N4BP2L2Q92802 583 aaPredicted RBP23.09■■□□□ 1.29
TTC3-225ENST00000540756 RNF31Q96EP0 1072 aa23.09■■□□□ 1.29
TTC3-225ENST00000540756 SLC29A1Q99808 456 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms