RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 PDCD2LQ9BRP1 358 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 RLIMQ9NVW2 624 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 TXNL4BQ9NX01 149 aaKnown RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 MYEF2Q9P2K5 600 aaKnown RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 KLF15Q9UIH9 416 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 DLGAP4Q9Y2H0 992 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PKD1L3Q7Z443 1732 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 ANKRD61A6NGH8 418 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 EIF3GO75821 320 aaKnown RBP eCLIP10.61□□□□□ -0.71
PBX1-212ENST00000540236 SBK3P0C264 359 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PCP4P48539 62 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PITPNAQ00169 270 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PUM1Q14671 1186 aaKnown RBP eCLIP10.61□□□□□ -0.71
PBX1-212ENST00000540236 RFTN2Q52LD8 501 aaPredicted RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 CPTPQ5TA50 214 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 FCRLBQ6BAA4 426 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 ZER1Q7Z7L7 766 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 HSPA12BQ96MM6 686 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 ZIC5Q96T25 663 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 SLC39A8Q9C0K1 460 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 LINC00597Q9H2U6 94 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PIM2Q9P1W9 311 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 DNMT3BQ9UBC3 853 aaKnown RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 LIPT1Q9Y234 373 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 GPR45Q9Y5Y3 372 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 RIMBP3CA6NJZ7 1639 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 RIMBP3BA6NNM3 1639 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 RIMBP3Q9UFD9 1639 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 GFRA2O00451 464 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 YKT6O15498 198 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 HK1P19367 917 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 RAB6AP20340 208 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 HMGB2P26583 209 aaKnown RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 MELKQ14680 651 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PEA15Q15121 130 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 RPS26P11Q5JNZ5 115 aaPredicted RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 NCMAPQ5T1S8 102 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 PAPD4Q6PIY7 484 aaKnown RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 RBMS3Q6XE24 437 aaKnown RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 DPPA4Q7L190 304 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 KIAA0907Q7Z7F0 614 aaPredicted RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 CFAP52Q8N1V2 620 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 TMEM145Q8NBT3 493 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 NIPSNAP1Q9BPW8 284 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 TMEM175Q9BSA9 504 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 ARHGAP39Q9C0H5 1083 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 SRRQ9GZT4 340 aa10.61□□□□□ -0.71
PBX1-212ENST00000540236 EIF5A2Q9GZV4 153 aaKnown RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 ACSS1Q9NUB1 689 aaPredicted RBP10.61□□□□□ -0.71
PBX1-212ENST00000540236 MECP2P51608 486 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 ACSM2AQ08AH3 577 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 COL19A1Q14993 1142 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 EIF4HQ15056 248 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 ACSM2BQ68CK6 577 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 FAM196AQ6ZSG2 479 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 INO80EQ8NBZ0 244 aaPredicted RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 P2RY13Q9BPV8 354 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 GSX2Q9BZM3 304 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 PARP12Q9H0J9 701 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 RGCCQ9H4X1 137 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 PIGVQ9NUD9 493 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 NUBP2Q9Y5Y2 271 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 TMEM200CA6NKL6 621 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 H7C1Q1 480 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 WRBO00258 174 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 PAK4O96013 591 aaPredicted RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 SPP1P10451 314 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 UBE2IP63279 158 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 SNTB1Q13884 538 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 TRAPPC5Q8IUR0 188 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 UROC1Q96N76 676 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 RBM14Q96PK6 669 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 ELF4Q99607 663 aaPredicted RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 SEMA4CQ9C0C4 833 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 B3GAT2Q9NPZ5 323 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 DCAF13Q9NV06 445 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 IMP3Q9NV31 184 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 CXorf65A6NEN9 183 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 CXCL3P19876 107 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 TYMPP19971 482 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 DNAJB2P25686 324 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 PITPNBP48739 271 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 ASAH1Q13510 395 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 FAM171BQ6P995 826 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 ZNF704Q6ZNC4 412 aaPredicted RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 CCDC190Q86UF4 302 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 SIAH1Q8IUQ4 282 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 RIMKLAQ8IXN7 391 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 KLHL36Q8N4N3 616 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 C10orf53Q8N6V4 93 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 FAM151AQ8WW52 585 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 GCDHQ92947 438 aaPredicted RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 BCL2L14Q9BZR8 327 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 CBY1Q9Y3M2 126 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 PARP4Q9UKK3 1724 aaKnown RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 LOC730098B7Z3J9 87 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 SLC16A6O15403 523 aa10.6□□□□□ -0.71
PBX1-212ENST00000540236 POU3F2P20265 443 aaPredicted RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 NFYAP23511 347 aaPredicted RBP10.6□□□□□ -0.71
PBX1-212ENST00000540236 TUSC3Q13454 348 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms