RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CMTM7Q96FZ5 175 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 PLPPR2Q96GM1 343 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ZC3HAV1LQ96H79 300 aaKnown RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 EXOC2Q96KP1 924 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 C7orf34Q96L11 122 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 CEP19Q96LK0 163 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 PSKH2Q96QS6 385 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 DHRS9Q9BPW9 319 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 MAPKAP1Q9BPZ7 522 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 MGME1Q9BQP7 344 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 CD244Q9BZW8 370 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 SLC22A4Q9H015 551 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 MAGEH1Q9H213 219 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 FBXO44Q9H4M3 255 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 IKZF5Q9H5V7 419 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 IPPKQ9H8X2 491 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 DDX28Q9NUL7 540 aaKnown RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 VNN3Q9NY84 501 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 TBC1D24Q9ULP9 559 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 SNX7Q9UNH6 387 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 POFUT2Q9Y2G5 429 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 SAMHD1Q9Y3Z3 626 aaKnown RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 POLR3HQ9Y535 204 aaPredicted RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 SPO11Q9Y5K1 396 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ARL5AQ9Y689 179 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 NUP205Q92621 2012 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 PI4KAP42356 2102 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 EML5Q05BV3 1969 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 UBA6A0AVT1 1052 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 B8ZZF3 427 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 FFAR2O15552 330 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 TSPAN6O43657 245 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 OLFM2O95897 454 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 CBSLP0DN79 551 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 ACADMP11310 421 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 BCKDHAP12694 445 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 PRPS1L1P21108 318 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 ALAS2P22557 587 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 DGKAP23743 735 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 GTF2E2P29084 291 aaKnown RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 ALDH4A1P30038 563 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 CBSP35520 551 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 OPRD1P41143 372 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 RFX2P48378 723 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 GZMKP49863 264 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 HTR6P50406 440 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 RORCP51449 518 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 CLCN7P51798 805 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 GALK2Q01415 458 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF235Q14590 738 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 SYT16Q17RD7 645 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 BCL7AQ4VC05 210 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 CTSL3PQ5NE16 218 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 TMEM201Q5SNT2 666 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 ARMC4Q5T2S8 1044 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 SLC36A4Q6YBV0 504 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 TMPRSS11AQ6ZMR5 421 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 C20orf204Q6ZNR8 217 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 C1orf229Q6ZS94 237 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 GPR155Q7Z3F1 870 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 HDDC2Q7Z4H3 204 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 GALNT5Q7Z7M9 940 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 SLC44A2Q8IWA5 706 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 ADGRG2Q8IZP9 1017 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 CYP4Z2PQ8N1L4 340 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 TCAIMQ8N3R3 496 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 LIX1Q8N485 282 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 STX19Q8N4C7 294 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 CLDN22Q8N7P3 220 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 DUSP18Q8NEJ0 188 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 OR13C4Q8NGS5 318 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 SUN5Q8TC36 379 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 BTN2A2Q8WVV5 523 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 JPH3Q8WXH2 748 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 PIGKQ92643 395 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 MCCC1Q96RQ3 725 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 CDC6Q99741 560 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 TBCDQ9BTW9 1192 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 MED18Q9BUE0 208 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 TTLL2Q9BWV7 592 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 GTPBP2Q9BX10 602 aaKnown RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 TAPBPLQ9BX59 468 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 MKRN2Q9H000 416 aaKnown RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 C12orf10Q9HB07 376 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 PDFQ9HBH1 243 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 ZBTB20Q9HC78 741 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 ISYNA1Q9NPH2 558 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 RPRD1BQ9NQG5 326 aaKnown RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 TMLHEQ9NVH6 421 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 FAM120CQ9NX05 1096 aaKnown RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 THUMPD1Q9NXG2 353 aaKnown RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 B3GNT2Q9NY97 397 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 MPP6Q9NZW5 540 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 KIF17Q9P2E2 1029 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 PILRBQ9UKJ0 227 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 UTS2RQ9UKP6 389 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 PNMA8BQ9ULN7 279 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-204ENST00000539847 WNT6Q9Y6F9 365 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 DENND4CQ5VZ89 1909 aa7.3□□□□□ -1.24
CCDC60-204ENST00000539847 FREM2Q5SZK8 3169 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms