RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 LHPPQ9H008 270 aa11.88□□□□□ -0.51
TSPAN9-207ENST00000539631 BAIAP2L1Q9UHR4 511 aa11.88□□□□□ -0.51
TSPAN9-207ENST00000539631 EXO1Q9UQ84 846 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-207ENST00000539631 CPAMD8Q8IZJ3 1885 aa11.88□□□□□ -0.51
TSPAN9-207ENST00000539631 MGAQ8IWI9 3026 aa11.88□□□□□ -0.51
TSPAN9-207ENST00000539631 DSPP15924 2871 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 C17orf105B2RV13 164 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 MKRN2OSH3BPM6 223 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 K7EM74 188 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF195O14628 629 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 SERPINA7P05543 415 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 BCKDHAP12694 445 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 ICAM2P13598 275 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 MAPK1P28482 360 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 FEN1P39748 380 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 XKP51811 444 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 DUSP2Q05923 314 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 BIKQ13323 160 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 LY6DQ14210 128 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 MYBPC3Q14896 1274 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 IL23RQ5VWK5 629 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 RGS9BPQ6ZS82 235 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 FAM47EQ6ZV65 393 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 LARP4Q71RC2 724 aaKnown RBP eCLIP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 MAVSQ7Z434 540 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 ST13P4Q8IZP2 240 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 LIX1Q8N485 282 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 C7orf57Q8NEG2 295 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 B3GNT7Q8NFL0 401 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 BRIX1Q8TDN6 353 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 GFM2Q969S9 779 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 EXOSC8Q96B26 276 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 KLHL29Q96CT2 875 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 CNRIP1Q96F85 164 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 ABHD17AQ96GS6 310 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 UBL7Q96S82 380 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 SLC25A23Q9BV35 468 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 ADNPQ9H2P0 1102 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 WDR55Q9H6Y2 383 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF552Q9H707 407 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 MMP25Q9NPA2 562 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 GPR83Q9NYM4 423 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 UTS2RQ9UKP6 389 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 WBP11Q9Y2W2 641 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 CLCA3PQ9Y6N3 262 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 USH1CQ9Y6N9 552 aa11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 SETXQ7Z333 2677 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-207ENST00000539631 GOLGA8QA0A0J9YX86 632 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 GOLGA8OA6NCC3 632 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 TRPC5OSA6NMA1 111 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 TCP11X1B4DZS4 312 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 GOLGA8NF8WBI6 632 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 AKAP10O43572 662 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 OR10H2O60403 315 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 VPS4BO75351 444 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 LRATO95237 230 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 PDGFAP04085 211 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 SLC35E2P0CK97 266 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 PRPS2P11908 318 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 CPMP14384 443 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 PORP16435 677 aaPredicted RBP11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 LBPP18428 481 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 DDCP20711 480 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 GPR143P51810 404 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 PGDP52209 483 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 PLIN5Q00G26 463 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 EMX2Q04743 252 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 MAD2L1Q13257 205 aaPredicted RBP11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 TERF2Q15554 542 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 SMU1Q2TAY7 513 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 SLC9B1Q4ZJI4 515 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 IKBIPQ70UQ0 350 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 TICAM1Q8IUC6 712 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 KIF2BQ8N4N8 673 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 SIRT6Q8N6T7 355 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF321PQ8N8H1 164 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 APCDD1LQ8NCL9 501 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 MORN4Q8NDC4 146 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 OR14A16Q8NHC5 309 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 ELP5Q8TE02 316 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 PSMF1Q92530 271 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 DAZLQ92904 295 aaKnown RBP11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 NCLNQ969V3 563 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 WBP1Q96G27 269 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 RBM18Q96H35 190 aaKnown RBP11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF681Q96N22 645 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 PELOQ9BRX2 385 aaKnown RBP11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 KCNK13Q9HB14 408 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 MIEF1Q9NQG6 463 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 PTGFRNQ9P2B2 879 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF223Q9UK11 482 aaPredicted RBP11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 PSME2Q9UL46 239 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 EIF3LQ9Y262 564 aaKnown RBP11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF780BQ9Y6R6 833 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 NBEAQ8NFP9 2946 aa11.86□□□□□ -0.51
TSPAN9-207ENST00000539631 TRBV11-1A0A0K0K1C0 115 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 A8MUI8 341 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 HRKO00198 91 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ATXN7O15265 892 aaPredicted RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 DDAH2O95865 285 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms