RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 KIAA1143Q96AT1 154 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 PPP1R16AQ96I34 528 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 ZIC5Q96T25 663 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 MED18Q9BUE0 208 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 POLDIP3Q9BY77 421 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 EPHX3Q9H6B9 360 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 ABCB9Q9NP78 766 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 MIEF1Q9NQG6 463 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 SPG21Q9NZD8 308 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 PLEKHB1Q9UF11 243 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 ACAD8Q9UKU7 415 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 MYL12BO14950 172 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 ALPPP05187 535 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 BCHEP06276 602 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 CSF3P09919 207 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 MSL3P1P0C860 447 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 AZGP1P25311 298 aaKnown RBP9.18□□□□□ -0.94
CDH13-204ENST00000539548 OPRD1P41143 372 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 TGM4P49221 684 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 RACK1P63244 317 aaKnown RBP9.18□□□□□ -0.94
CDH13-204ENST00000539548 TAP2Q03519 686 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 TSTA3Q13630 321 aaPredicted RBP9.18□□□□□ -0.94
CDH13-204ENST00000539548 TRIM60Q495X7 471 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 SLC35F1Q5T1Q4 408 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 LIPKQ5VXJ0 399 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 PAQR6Q6TCH4 344 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 CD300LDQ6UXZ3 194 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 CCDC149Q6ZUS6 474 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 DPPA4Q7L190 304 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 DDX53Q86TM3 631 aaKnown RBP9.18□□□□□ -0.94
CDH13-204ENST00000539548 GPR65Q8IYL9 337 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 VWA5B2Q8N398 1253 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 OR52I1Q8NGK6 324 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 RASSF5Q8WWW0 418 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 TMEM19Q96HH6 336 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 ZNF354BQ96LW1 612 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 DMRTB1Q96MA1 342 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 TMEM246Q9BRR3 403 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 MMP28Q9H239 520 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 SPNS1Q9H2V7 528 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 SLA2Q9H6Q3 261 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 TBC1D14Q9P2M4 693 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 TESQ9UGI8 421 aaKnown RBP9.18□□□□□ -0.94
CDH13-204ENST00000539548 KLHL20Q9Y2M5 609 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 PLXND1Q9Y4D7 1925 aa9.18□□□□□ -0.94
CDH13-204ENST00000539548 A0A1W2PQL4 384 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 FABP12A6NFH5 140 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ANKDD1BA6NHY2 528 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 A8MV72 311 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 B4DXG7 233 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 STK25O00506 426 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 PLD2O14939 933 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 MMP20O60882 483 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 GUCY1B2O75343 617 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 LEFTY1O75610 366 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 RAB36O95755 333 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 PBLDP30039 288 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 SLC9A3P48764 834 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 MEF2AQ02078 507 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 MXD1Q05195 221 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 COX10Q12887 443 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 SLAMF1Q13291 335 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 TAB1Q15750 504 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 KLHL22Q53GT1 634 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ARSIQ5FYB1 569 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 USP30Q70CQ3 517 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 UTS2BQ765I0 119 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 SLC9B2Q86UD5 537 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 NOXA1Q86UR1 476 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 TMEM25Q86YD3 366 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 TMC8Q8IU68 726 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 MMP21Q8N119 569 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 SLC39A11Q8N1S5 342 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 AUTS2Q8WXX7 1259 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ZNF689Q96CS4 500 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 AP2M1Q96CW1 435 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 DIRAS2Q96HU8 199 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 C11orf54Q9H0W9 315 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 TVP23BQ9NYZ1 205 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 AHSPQ9NZD4 102 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 LINC00854A0A1B0GVQ3 168 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 TFECO14948 347 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 POLR1CO15160 346 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 TLX2O43763 284 aaPredicted RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 PRKYO43930 277 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 CXCL10P02778 98 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 YES1P07947 543 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 CLEC2LP0C7M8 214 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 DDCP20711 480 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 MYL9P24844 172 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 HLA-DMAP28067 261 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ETV5P41161 510 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 ETV1P50549 477 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 RPS26P62854 115 aaKnown RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 EFNB1P98172 346 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 TARDBPQ13148 414 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDH13-204ENST00000539548 HNRNPA0Q13151 305 aaKnown RBP9.17□□□□□ -0.94
CDH13-204ENST00000539548 NDUFA9Q16795 377 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 DEFB115Q30KQ5 88 aa9.17□□□□□ -0.94
CDH13-204ENST00000539548 PLK5Q496M5 336 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms