RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 NXPE3Q969Y0 559 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 DIRAS2Q96HU8 199 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 IL17FQ96PD4 163 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 SLC35A5Q9BS91 424 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 REEP4Q9H6H4 257 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 ZNF556Q9HAH1 456 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 DMRT3Q9NQL9 472 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 C1GALT1Q9NS00 363 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 PRKAB1Q9Y478 270 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 MAU2Q9Y6X3 613 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 CKAP5Q14008 2032 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 PIPSLA2A3N6 862 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 SLC35F4A4IF30 521 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 KPNA3O00505 521 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 DPM1O60762 260 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 RECKO95980 971 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 PCSK2P16519 638 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 XPAP23025 273 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 SLC5A12Q1EHB4 618 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 RBM45Q8IUH3 476 aaKnown RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 C11orf65Q8NCR3 313 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 GOT1L1Q8NHS2 421 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 METTL2AQ96IZ6 378 aaKnown RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 COMMD3Q9UBI1 195 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 DKK3Q9UBP4 350 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 MKLN1Q9UL63 735 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 PLAGL1Q9UM63 463 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 A0A0B4J293 547 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 A0A0G2JMP0 313 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 PRRT4C9JH25 899 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 TBX6O95947 436 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 KLK1P06870 262 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 TNNI3P19429 210 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 TAS2R50P59544 299 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 ZNF763Q0D2J5 394 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 HNRNPA0Q13151 305 aaKnown RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 INSL4Q14641 139 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 ANXA8L1Q5VT79 327 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 FAM83HQ6ZRV2 1179 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 ATCAYQ86WG3 371 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 RNF130Q86XS8 419 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 LAS2Q8IYD9 372 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 TAGAPQ8N103 731 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 C16orf78Q8WTQ4 265 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 SNAPC3Q92966 411 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 RSPRY1Q96DX4 576 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 RNF31Q96EP0 1072 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 DTD2Q96FN9 168 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 SGPP1Q9BX95 441 aa11.95□□□□□ -0.5
SFSWAP-208ENST00000539506 OTOL1A6NHN0 477 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 RGS13O14921 159 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 NCR1O76036 304 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 PDE7AQ13946 482 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 DHCR24Q15392 516 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 C1orf53Q5VUE5 145 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 MRPL43Q8N983 215 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 VPS37AQ8NEZ2 397 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 WDR34Q96EX3 536 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 OPALINQ96PE5 141 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 BHLHE41Q9C0J9 482 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 POLR2J2Q9GZM3 115 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 HHATLQ9HCP6 504 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 ZNF282Q9UDV7 671 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 A0A1W2PQL4 384 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 C12orf71A8MTZ7 269 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 CAPN5O15484 640 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 C1GALT1C1LP0DN25 315 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 PSKH1P11801 424 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 EPCAMP16422 314 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 CHMP24386 653 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 APEX1P27695 318 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 DUSP7Q16829 419 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 FAM71E1Q6IPT2 247 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 TUBA3EQ6PEY2 450 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 SZRD1Q7Z422 152 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 GRASPQ7Z6J2 395 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 TRAPPC5Q8IUR0 188 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 NLGN4YQ8NFZ3 816 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 JPH3Q8WXH2 748 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 FCGR1BQ92637 280 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 TM9SF2Q99805 663 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 WFDC6Q9BQY6 131 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 SPATA9Q9BWV2 254 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 MARK1Q9P0L2 795 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 V9GYH0 126 aa11.94□□□□□ -0.5
SFSWAP-208ENST00000539506 SPTBN5Q9NRC6 3674 aaKnown RBP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 CCDC182A6NF36 153 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 PAPLNO95428 1278 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TIMP1P01033 207 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TSPAN19P0C672 248 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 CEBPBP17676 345 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 C2orf80Q0P641 193 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 SCARB2Q14108 478 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 CLPPQ16740 277 aaPredicted RBP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 LINC00299Q6ZSB3 139 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 NOXA1Q86UR1 476 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 ARRDC3Q96B67 414 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 FOPNLQ96NB1 174 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 ABCG4Q9H172 646 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms