RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SLC6A6P31641 620 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 SLC6A9P48067 706 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 CHAF1BQ13112 559 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 LSAMPQ13449 338 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF267Q14586 743 aaPredicted RBP13.9□□□□□ -0.18
CACNB1-206ENST00000539338 COQ5Q5HYK3 327 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 MEDAGQ5VYS4 303 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 DTX3Q8N9I9 347 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 SH3YL1Q96HL8 342 aaPredicted RBP13.9□□□□□ -0.18
CACNB1-206ENST00000539338 PHOX2BQ99453 314 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 MTMR10Q9NXD2 777 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 ACSL5Q9ULC5 683 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 TRAV6A0A075B6T7 132 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 LOC100509620A0A075B734 347 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 EIF1AYO14602 144 aaKnown RBP13.9□□□□□ -0.18
CACNB1-206ENST00000539338 CDC123O75794 336 aaPredicted RBP13.9□□□□□ -0.18
CACNB1-206ENST00000539338 LAMP1P11279 417 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 HSD3B1P14060 373 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 TNFRSF1BP20333 461 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 HSD3B2P26439 372 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 DEFB103AP81534 67 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 SLAMF1Q13291 335 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 MAB21L1Q13394 359 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 C10orf62Q5T681 223 aaPredicted RBP13.9□□□□□ -0.18
CACNB1-206ENST00000539338 SLC29A4Q7RTT9 530 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 ANKRD33Q7Z3H0 272 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 GPALPP1Q8IXQ4 340 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 OR6C4Q8NGE1 309 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 APIPQ96GX9 242 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 FEVQ99581 238 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 MGLLQ99685 303 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 TPSD1Q9BZJ3 242 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 RETREG1Q9H6L5 497 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 PCDHB14Q9Y5E9 798 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 C4AP0C0L4 1744 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 SCAMP2O15127 329 aaKnown RBP13.9□□□□□ -0.18
CACNB1-206ENST00000539338 KDM4BO94953 1096 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 BMP2P12643 396 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 F8A1P23610 371 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 CRISP1P54107 249 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 RAB2AP61019 212 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 E2F1Q01094 437 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF45Q02386 682 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 GALNT1Q10472 559 aaPredicted RBP13.9□□□□□ -0.18
CACNB1-206ENST00000539338 C6orf120Q7Z4R8 191 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 ZSWIM9Q86XI8 627 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 PLA2G15Q8NCC3 412 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF548Q8NEK5 533 aaPredicted RBP13.9□□□□□ -0.18
CACNB1-206ENST00000539338 NETO1Q8TDF5 533 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 CCDC115Q96NT0 180 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 MNTQ99583 582 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 INPP5KQ9BT40 448 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 FXYD6-FXYD2A0A087WZ82 144 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 A0A1W2PP55 124 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF726A6NNF4 738 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 RASGEF1BQ0VAM2 473 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 CES4AQ5XG92 561 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 KDELC1Q6UW63 502 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 NRROSQ86YC3 692 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF101Q8IZC7 436 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 CDX2Q99626 313 aaPredicted RBP13.9□□□□□ -0.18
CACNB1-206ENST00000539338 FXYD6Q9H0Q3 95 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 C12orf4Q9NQ89 552 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 GPR34Q9UPC5 381 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 TMEM107Q6UX40 140 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 GOLM1Q8NBJ4 401 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 NUP43Q8NFH3 380 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 OR8K3Q8NH51 312 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 EPYCQ99645 322 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 KCNK12Q9HB15 430 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 SDR39U1Q9NRG7 319 aaPredicted RBP13.89□□□□□ -0.19
CACNB1-206ENST00000539338 PLCH1Q4KWH8 1693 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 DNAJC25-GNG10A0A024R161 153 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 H3BNC9 293 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 M0QZQ0 153 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 KIAA0513O60268 411 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 PRDX3P30048 256 aaKnown RBP13.89□□□□□ -0.19
CACNB1-206ENST00000539338 SPINT3P49223 89 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 MAPK14Q16539 360 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 CRTC1Q6UUV9 634 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 SLC39A11Q8N1S5 342 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 SAMD12Q8N8I0 201 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 GATSQ8NAP1 163 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 OR51A7Q8NH64 312 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 SHKBP1Q8TBC3 707 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 CD200R1Q8TD46 325 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 GPR83Q9NYM4 423 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 GPRC5BQ9NZH0 403 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 HSPB11Q9Y547 144 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 A0A1W2PPK0 400 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 BOLA2-SMG1P6H3BVE0 249 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 RPS21P63220 83 aaKnown RBP13.89□□□□□ -0.19
CACNB1-206ENST00000539338 FLYWCH1Q4VC44 716 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 MANEAQ5SRI9 462 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 ULK3Q6PHR2 472 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 DCP2Q8IU60 420 aaKnown RBP13.89□□□□□ -0.19
CACNB1-206ENST00000539338 DTWD1Q8N5C7 304 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 SPERTQ8NA61 448 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 C3orf58Q8NDZ4 430 aa13.89□□□□□ -0.19
CACNB1-206ENST00000539338 ACVR1CQ8NER5 493 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms