RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ATP6AP2A0A1C7CYW4 349 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 DYRK3O43781 588 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 SUSD5O60279 629 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 PRKRAO75569 313 aaKnown RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 ATP6AP2O75787 350 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 HOXD4P09016 255 aaPredicted RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 GLI4P10075 376 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 ALOX15P16050 662 aaPredicted RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 ENDOUP21128 410 aaKnown RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 STX2P32856 288 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 PIGAP37287 484 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 PIK3CBP42338 1070 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 MAN2A2P49641 1150 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 RAP1GDS1P52306 607 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 HNRNPH2P55795 449 aaKnown RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 NAB1Q13506 487 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 SETDB1Q15047 1291 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 C18orf63Q68DL7 685 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 ZDHHC24Q6UX98 284 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 B3GNT6Q6ZMB0 384 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 GPR180Q86V85 440 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 CENPLQ8N0S6 344 aaPredicted RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 TEX9Q8N6V9 391 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 FBXO25Q8TCJ0 367 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 FBF1Q8TES7 1133 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 PAQR8Q8TEZ7 354 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 TANKQ92844 425 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 RGMAQ96B86 450 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 NXNL1Q96CM4 212 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 SPACA9Q96E40 222 aaPredicted RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 RBM18Q96H35 190 aaKnown RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 ART5Q96L15 291 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 ZNF717Q9BY31 904 aaPredicted RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 ZNF703Q9H7S9 590 aaPredicted RBP11.54□□□□□ -0.56
VAMP1-206ENST00000538970 ABCA2Q9BZC7 2435 aa11.54□□□□□ -0.56
VAMP1-206ENST00000538970 A0A0G2JNJ9 132 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 LRRC3CA6NJW4 275 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 SYCE1LA8MT33 242 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 KLK8O60259 260 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 HCN1O60741 890 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 WDR1O75083 606 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 BUD31P41223 144 aaPredicted RBP11.53□□□□□ -0.56
VAMP1-206ENST00000538970 MAGEA4P43358 317 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 ARFIP1P53367 373 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 PLTPP55058 493 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 IRF9Q00978 393 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 CAV1Q03135 178 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 BIKQ13323 160 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 SPRED3Q2MJR0 410 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 PRAMEF20Q5VT98 475 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 LIPJQ5W064 366 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 SLC22A10Q63ZE4 541 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 CCDC25Q86WR0 208 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 MYLK4Q86YV6 388 aaPredicted RBP11.53□□□□□ -0.56
VAMP1-206ENST00000538970 ST13P4Q8IZP2 240 aaPredicted RBP11.53□□□□□ -0.56
VAMP1-206ENST00000538970 FBXW8Q8N3Y1 598 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 SLC15A4Q8N697 577 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 RHEBL1Q8TAI7 183 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 KCTD4Q8WVF5 259 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 SARAFQ96BY9 339 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 MTERF1Q99551 399 aaKnown RBP11.53□□□□□ -0.56
VAMP1-206ENST00000538970 PELOQ9BRX2 385 aaKnown RBP11.53□□□□□ -0.56
VAMP1-206ENST00000538970 CENPKQ9BS16 269 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 CNPPD1Q9BV87 410 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.53□□□□□ -0.56
VAMP1-206ENST00000538970 SPRR3Q9UBC9 169 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 Q9UFV3 132 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 KCNN3Q9UGI6 736 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 ACOT9Q9Y305 439 aa11.53□□□□□ -0.56
VAMP1-206ENST00000538970 UTP11Q9Y3A2 253 aaKnown RBP11.53□□□□□ -0.56
VAMP1-206ENST00000538970 CHCHD2Q9Y6H1 151 aaPredicted RBP11.53□□□□□ -0.56
VAMP1-206ENST00000538970 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.53□□□□□ -0.56
VAMP1-206ENST00000538970 HCFC1P51610 2035 aa11.52□□□□□ -0.56
VAMP1-206ENST00000538970 A0A087X1B8 175 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 A0A0A6YYD5 115 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 TRGV5A0A0B4J1U4 118 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 CCDC189A1A4V9 331 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 H0YIV9 168 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 PROM1O43490 865 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 TMPRSS11DO60235 418 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 EEDO75530 441 aaKnown RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 CLPSP04118 112 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 FBXO45P0C2W1 286 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 RFPL3SP0C7P2 107 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 NR2F6P10588 404 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 TLX1P31314 330 aaPredicted RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ADH7P40394 386 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ZFP36L2P47974 494 aaKnown RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 RPS13P62277 151 aaKnown RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 HERVK_113P63132 956 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 ERVK-8P63133 956 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 KCNJ2P63252 427 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 TBL3Q12788 808 aaKnown RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 SLC10A1Q14973 349 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 EBPQ15125 230 aaKnown RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 TRADDQ15628 312 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 C1orf185Q5T7R7 199 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 WLSQ5T9L3 541 aa11.52□□□□□ -0.57
VAMP1-206ENST00000538970 MRM1Q6IN84 353 aaKnown RBP11.52□□□□□ -0.57
VAMP1-206ENST00000538970 CCDC91Q7Z6B0 441 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms