RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ERV3-1Q14264 604 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 MPEG1Q2M385 716 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 ZNF750Q32MQ0 723 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 GTDC1Q4AE62 458 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 DCAF12Q5T6F0 453 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 OR4N5Q8IXE1 308 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 PRSS58Q8IYP2 241 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 DEFB107AQ8IZN7 70 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 OR4K14Q8NGD5 310 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 MCUR1Q96AQ8 359 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 ROPN1LQ96C74 230 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 ZBED6CLQ96FA7 236 aaPredicted RBP13.31□□□□□ -0.28
CD4-208ENST00000538827 ZNF764Q96H86 408 aaPredicted RBP13.31□□□□□ -0.28
CD4-208ENST00000538827 GBP5Q96PP8 586 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 BTBD10Q9BSF8 475 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 LRMDAQ9H2I8 198 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 CLK4Q9HAZ1 481 aaKnown RBP13.31□□□□□ -0.28
CD4-208ENST00000538827 FBXO8Q9NRD0 319 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 PRTFDC1Q9NRG1 225 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 BTNL2Q9UIR0 455 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 PSME2Q9UL46 239 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 PCDHGB4Q9UN71 923 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 SATB2Q9UPW6 733 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 A0A096LPI6 279 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 PRSS51A0A1B0GVH4 220 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 A0A1W2PS29 197 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 FAM149AA5PLN7 773 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 RNASET2O00584 256 aaKnown RBP13.3□□□□□ -0.28
CD4-208ENST00000538827 CYR61O00622 381 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 PLD2O14939 933 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 FGF17O60258 216 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 JRKO75564 520 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 CSNK2A2P19784 350 aaPredicted RBP13.3□□□□□ -0.28
CD4-208ENST00000538827 PPP2R1BP30154 601 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 PTGER1P34995 402 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 PSME3P61289 254 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 FOLH1Q04609 750 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 SPDYE7PQ495Y7 208 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 MINDY4Q4G0A6 757 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 HACD2Q6Y1H2 254 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 BNC2Q6ZN30 1099 aaPredicted RBP13.3□□□□□ -0.28
CD4-208ENST00000538827 COX15Q7KZN9 410 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 ZNF551Q7Z340 670 aaPredicted RBP13.3□□□□□ -0.28
CD4-208ENST00000538827 SZRD1Q7Z422 152 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 PGAM4Q8N0Y7 254 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 NATD1Q8N6N6 113 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 WDR36Q8NI36 951 aaKnown RBP13.3□□□□□ -0.28
CD4-208ENST00000538827 DNAJB14Q8TBM8 379 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 GTF2H4Q92759 462 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 TBC1D20Q96BZ9 403 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 CCDC115Q96NT0 180 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 TRIM8Q9BZR9 551 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 SLAMF7Q9NQ25 335 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 TAS2R1Q9NYW7 299 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 ADA2Q9NZK5 511 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 MAP10Q9P2G4 905 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 CTSFQ9UBX1 484 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 CES1P1Q9UKY3 287 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 VPS4AQ9UN37 437 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 MAN2B2Q9Y2E5 1009 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 MAP4K5Q9Y4K4 846 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 SNX8Q9Y5X2 465 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 B3GALT1Q9Y5Z6 326 aa13.3□□□□□ -0.28
CD4-208ENST00000538827 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.3□□□□□ -0.28
CD4-208ENST00000538827 PTPRBP23467 1997 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 BLACEA4D250 179 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 FXYD1O00168 92 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 CLDN4O14493 209 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 DKK1O94907 266 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 AGXTP21549 392 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 CPOXP36551 454 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 CDK9P50750 372 aaKnown RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 MANFP55145 182 aaKnown RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 DCDP81605 110 aaKnown RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 DUSP2Q05923 314 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 ABHD18Q0P651 414 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 LRRC74AQ0VAA2 488 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 TARDBPQ13148 414 aaKnown RBP eCLIP13.29□□□□□ -0.28
CD4-208ENST00000538827 GAB1Q13480 694 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 NKAIN1Q4KMZ8 207 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 ZNF621Q6ZSS3 439 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 MARCH9Q86YJ5 346 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 ZC3H7AQ8IWR0 971 aaKnown RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 ZNF595Q8IYB9 648 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 LRRC25Q8N386 305 aaPredicted RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 DPP10Q8N608 796 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 SLC38A9Q8NBW4 561 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 OR5P2Q8WZ92 322 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 TANKQ92844 425 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 MR1Q95460 341 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 LRRC58Q96CX6 371 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 CNRIP1Q96F85 164 aaPredicted RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 TAAR9Q96RI9 348 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 PAIP1Q9H074 479 aaKnown RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 MKKSQ9NPJ1 570 aaPredicted RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 SERHLQ9NQF3 203 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 SLAMF8Q9P0V8 285 aa13.29□□□□□ -0.28
CD4-208ENST00000538827 IFT80Q9P2H3 777 aaPredicted RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 GPN3Q9UHW5 284 aaPredicted RBP13.29□□□□□ -0.28
CD4-208ENST00000538827 ACSL6Q9UKU0 697 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms