RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SCN2BO60939 215 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 KCNH1O95259 989 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 FURINP09958 794 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 RNH1P13489 461 aaKnown RBP16.2■□□□□ 0.18
CLN6-202ENST00000538696 EFNA1P20827 205 aaPredicted RBP16.2■□□□□ 0.18
CLN6-202ENST00000538696 STAT5AP42229 794 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 XCR1P46094 333 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 FOXL2P58012 376 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 PDE7AQ13946 482 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 NCF4Q15080 339 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 PRSS53Q2L4Q9 553 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 CPTPQ5TA50 214 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 IKBIPQ70UQ0 350 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 OVCH1Q7RTY7 1134 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 CAMKMTQ7Z624 323 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 GPR180Q86V85 440 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 TMEM151BQ8IW70 566 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 MSRB3Q8IXL7 192 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 SLC15A3Q8IY34 581 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 TMEM132CQ8N3T6 1108 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 FAM47BQ8NA70 645 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 TMEM125Q96AQ2 219 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 TM4SF18Q96CE8 201 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 COQ8BQ96D53 544 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 ITCHQ96J02 903 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 CGREF1Q99674 301 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 DUSP26Q9BV47 211 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 YIPF2Q9BWQ6 316 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 PAIP1Q9H074 479 aaKnown RBP16.2■□□□□ 0.18
CLN6-202ENST00000538696 SLC26A1Q9H2B4 701 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 RMND5AQ9H871 391 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 MKKSQ9NPJ1 570 aaPredicted RBP16.2■□□□□ 0.18
CLN6-202ENST00000538696 TEX10Q9NXF1 929 aaPredicted RBP16.2■□□□□ 0.18
CLN6-202ENST00000538696 PHF11Q9UIL8 331 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 ATG4BQ9Y4P1 393 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 PCDHA9Q9Y5H5 950 aa16.2■□□□□ 0.18
CLN6-202ENST00000538696 A0A096LPI6 279 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 LOC101059948A0A1B0GTJ6 334 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 C9J4A7 227 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 TLX3O43711 291 aaPredicted RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 JRKO75564 520 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 PRKRAO75569 313 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 AIFM1O95831 613 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 ALBP02768 609 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 HOXB9P17482 250 aaPredicted RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 CPN2P22792 545 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 ME2P23368 584 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 CDKN2CP42773 168 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 HNRNPFP52597 415 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 TRA2BP62995 288 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 TNFRSF17Q02223 184 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 KLC1Q07866 573 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 SELPLGQ14242 412 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 TGIF1Q15583 401 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 VWA2Q5GFL6 755 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 RABL3Q5HYI8 236 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 SAMD4BQ5PRF9 694 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 CROCCQ5TZA2 2017 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 C1orf146Q5VVC0 180 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 MLIPQ5VWP3 458 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 C18orf63Q68DL7 685 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 ERMP1Q7Z2K6 904 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 CLECL1Q8IZS7 167 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 FAM156AQ8NDB6 213 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 TMEM52Q8NDY8 209 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 OR8J2Q8NGG1 315 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 DNAJB14Q8TBM8 379 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 ADAMTS18Q8TE60 1221 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 MIEF2Q96C03 454 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 PPCDCQ96CD2 204 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 LANCL2Q9NS86 450 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 FAM120CQ9NX05 1096 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 VAPAQ9P0L0 249 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 SH3BP4Q9P0V3 963 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 ZNF282Q9UDV7 671 aaPredicted RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 CD300AQ9UGN4 299 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 GPN3Q9UHW5 284 aaPredicted RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 POMPQ9Y244 141 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 WDFY3Q8IZQ1 3526 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 TRBV5-3A0A0A0MS03 114 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 A0A1W2PR48 441 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 PRORSD1PA6NEY8 169 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 VSTM2BA6NLU5 285 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 FAM227AF5H4B4 570 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 CYR61O00622 381 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 PROM1O43490 865 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 ENTPD5O75356 428 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 BMP10O95393 424 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 NPPAP01160 153 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 TCN2P20062 427 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 MSX2P35548 267 aaPredicted RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 RPL3P39023 403 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 EFNA3P52797 238 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 PCBP4P57723 403 aaKnown RBP16.19■□□□□ 0.18
CLN6-202ENST00000538696 DNASE1L3Q13609 305 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 ERV3-1Q14264 604 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 NKG7Q16617 165 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 LRIF1Q5T3J3 769 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 C6orf163Q5TEZ5 329 aa16.19■□□□□ 0.18
CLN6-202ENST00000538696 NANOGP8Q6NSW7 305 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms