RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TUBA3EQ6PEY2 450 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 CCBE1Q6UXH8 406 aaPredicted RBP11.35□□□□□ -0.59
CPNE8-203ENST00000538596 UNC5DQ6UXZ4 953 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 FAM20CQ8IXL6 584 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 TFGQ92734 400 aaPredicted RBP11.35□□□□□ -0.59
CPNE8-203ENST00000538596 MACROD1Q9BQ69 325 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 LGR4Q9BXB1 951 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 RERGLQ9H628 205 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 EHD3Q9NZN3 535 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 MARK1Q9P0L2 795 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 ICKQ9UPZ9 632 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 PCDHGA4Q9Y5G9 962 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 HTR3EA5X5Y0 456 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 M0R3H8 397 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 PSMD11O00231 422 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 PDPK1O15530 556 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 CSO75390 466 aaKnown RBP11.35□□□□□ -0.59
CPNE8-203ENST00000538596 MED26O95402 600 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 SERPIND1P05546 499 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 ALPPL2P10696 532 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 OSMP13725 252 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 CD72P21854 359 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 RPS19P39019 145 aaKnown RBP11.35□□□□□ -0.59
CPNE8-203ENST00000538596 TEKQ02763 1124 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 DCST1Q5T197 706 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 C19orf48Q6RUI8 117 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 TCEANCQ8N8B7 351 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 Q8N9G6 341 aaPredicted RBP11.35□□□□□ -0.59
CPNE8-203ENST00000538596 SLC7A13Q8TCU3 470 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 TAPBPLQ9BX59 468 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 BARHL1Q9BZE3 327 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 KCNK12Q9HB15 430 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 SLC25A19Q9HC21 320 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 SEMA3GQ9NS98 782 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 TMCC3Q9ULS5 477 aa11.35□□□□□ -0.59
CPNE8-203ENST00000538596 SH3D21A4FU49 640 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 GLOD5A6NK44 160 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 APOL3O95236 402 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 OR12D1P0DN82 309 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 TARDBPQ13148 414 aaKnown RBP eCLIP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 ZMAT1Q5H9K5 638 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 SPANXN2Q5MJ10 180 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 IKBIPQ70UQ0 350 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 C17orf64Q86WR6 236 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 MMAAQ8IVH4 418 aaKnown RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 KRT78Q8N1N4 520 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 MRPL43Q8N983 215 aaKnown RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 ZNF557Q8N988 423 aaPredicted RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 RAD51AP1Q96B01 352 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 YIPF4Q9BSR8 244 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 MS4A8Q9BY19 250 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 TPK1Q9H3S4 243 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 DPEP2Q9H4A9 486 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 CNOT2Q9NZN8 540 aaKnown RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 UGT2A1Q9Y4X1 527 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 PEX16Q9Y5Y5 336 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 A3GALT2U3KPV4 340 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 KIF26AQ9ULI4 1882 aaPredicted RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 PNMA8CA0A1B0GUJ8 204 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 RGS5O15539 181 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 LRRTM2O43300 516 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 SLC28A2O43868 658 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 PRNPP04156 253 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 HBQ1P09105 142 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 DDX6P26196 483 aaKnown RBP eCLIP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 RCVRNP35243 200 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 NR4A2P43354 598 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 XKP51811 444 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 PGBD2Q6P3X8 592 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 LCTLQ6UWM7 567 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 GPR65Q8IYL9 337 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 C9orf43Q8TAL5 461 aaPredicted RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 SETD7Q8WTS6 366 aaKnown RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 XAGE5Q8WWM1 108 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 OR5P2Q8WZ92 322 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 UBE2E3Q969T4 207 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 TREX2Q9BQ50 279 aaPredicted RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 ASPNQ9BXN1 380 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 POLR2J3Q9H1A7 115 aaKnown RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 SIAEQ9HAT2 523 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 A4GALTQ9NPC4 353 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 TVP23BQ9NYZ1 205 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 LSM2Q9Y333 95 aaKnown RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 HEPACAM2A8MVW5 462 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 LATO43561 262 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 LCMT2O60294 686 aaKnown RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 ADAP00813 363 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 H1F0P07305 194 aaKnown RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 GSTT2P0CG29 244 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 GSTT2BP0CG30 244 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 ITGB7P26010 798 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 TNFSF8P32971 234 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 HOXD12P35452 270 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 SOX6P35712 828 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 PCBP4P57723 403 aaKnown RBP11.34□□□□□ -0.59
CPNE8-203ENST00000538596 MXD1Q05195 221 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 MADCAM1Q13477 382 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 LRRC26Q2I0M4 334 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 LRIT3Q3SXY7 679 aa11.34□□□□□ -0.59
CPNE8-203ENST00000538596 CCDC190Q86UF4 302 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms