RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 ELP5Q8TE02 316 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 PTPMT1Q8WUK0 201 aaPredicted RBP12.32□□□□□ -0.44
COPS7A-207ENST00000538375 VMP1Q96GC9 406 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 PFDN4Q9NQP4 134 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 NKIRAS1Q9NYS0 192 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 MCM8Q9UJA3 840 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 PSME2Q9UL46 239 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 DLGAP4Q9Y2H0 992 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 PCDHA9Q9Y5H5 950 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 CSAG2Q9Y5P2 127 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 PTGDR2Q9Y5Y4 395 aa12.32□□□□□ -0.44
COPS7A-207ENST00000538375 ITM2AO43736 263 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 MAN1A2O60476 641 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 LYPLA1O75608 230 aaPredicted RBP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 SERPINE1P05121 402 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 IL3P08700 152 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 TIA1P31483 386 aaKnown RBP eCLIP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 SOX11P35716 441 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 SERPINB5P36952 375 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 CASRP41180 1078 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 XKP51811 444 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 ABCE1P61221 599 aaKnown RBP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 TRA2BP62995 288 aaKnown RBP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 RAE1P78406 368 aaKnown RBP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 PLIN5Q00G26 463 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 C2orf80Q0P641 193 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 STX3Q13277 289 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 ZNF267Q14586 743 aaPredicted RBP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 NR6A1Q15406 480 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 TERF2Q15554 542 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 H3F3CQ6NXT2 135 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 IGFL2Q6UWQ7 119 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 DGAT2L6Q6ZPD8 337 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 HOMEZQ8IX15 550 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 MMP21Q8N119 569 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 BEST3Q8N1M1 668 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 SUN3Q8TAQ9 357 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 C16orf78Q8WTQ4 265 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 TWIST2Q8WVJ9 160 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 RIT1Q92963 219 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 PNPLA2Q96AD5 504 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 ARL8AQ96BM9 186 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 PELOQ9BRX2 385 aaKnown RBP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 CNPPD1Q9BV87 410 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 TRIM4Q9C037 500 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 ZNF395Q9H8N7 513 aaPredicted RBP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 LIN28AQ9H9Z2 209 aaKnown RBP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 ANKRD10Q9NXR5 420 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 COPS7AQ9UBW8 275 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 ZDHHC2Q9UIJ5 367 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 POLR3HQ9Y535 204 aaPredicted RBP12.31□□□□□ -0.44
COPS7A-207ENST00000538375 DNAJC15Q9Y5T4 150 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 ZNF780BQ9Y6R6 833 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 SPTA1P02549 2419 aa12.31□□□□□ -0.44
COPS7A-207ENST00000538375 HECTD1Q9ULT8 2610 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 TMEM114B3SHH9 223 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 PYCARD-AS1I3L0S3 204 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 SKAP2O75563 359 aaPredicted RBP12.3□□□□□ -0.44
COPS7A-207ENST00000538375 RSL1D1O76021 490 aaKnown RBP12.3□□□□□ -0.44
COPS7A-207ENST00000538375 ZFAND5O76080 213 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 DHRS4L1P0CG22 281 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 SLC35E2P0CK97 266 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 H2AFXP16104 143 aaPredicted RBP12.3□□□□□ -0.44
COPS7A-207ENST00000538375 NT5EP21589 574 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 GRK2P25098 689 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 ARRB2P32121 409 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 FEN1P39748 380 aaKnown RBP12.3□□□□□ -0.44
COPS7A-207ENST00000538375 SLC1A6P48664 564 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 IGLV3-21P80748 117 aaPredicted RBP12.3□□□□□ -0.44
COPS7A-207ENST00000538375 TLE1Q04724 770 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 HEPACAMQ14CZ8 416 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 TLR1Q15399 786 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 ZNF750Q32MQ0 723 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 GALNTL6Q49A17 601 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 C6orf163Q5TEZ5 329 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 AGBL2Q5U5Z8 902 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 FAM180BQ6P0A1 224 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 HSDL2Q6YN16 418 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 Q6ZS92 163 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 ST13P4Q8IZP2 240 aaPredicted RBP12.3□□□□□ -0.44
COPS7A-207ENST00000538375 CISD2Q8N5K1 135 aaKnown RBP12.3□□□□□ -0.44
COPS7A-207ENST00000538375 ZNF321PQ8N8H1 164 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 APCDD1LQ8NCL9 501 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 SLC2A12Q8TD20 617 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 HAS2Q92819 552 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 TLCD1Q96CP7 247 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 KLHL29Q96CT2 875 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 SENP5Q96HI0 755 aaPredicted RBP12.3□□□□□ -0.44
COPS7A-207ENST00000538375 UTP23Q9BRU9 249 aaKnown RBP12.3□□□□□ -0.44
COPS7A-207ENST00000538375 EPN3Q9H201 632 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 TUBB1Q9H4B7 451 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 LRTM1Q9HBL6 345 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 C1orf109Q9NX04 203 aa12.3□□□□□ -0.44
COPS7A-207ENST00000538375 A0A1W2PS29 197 aa12.29□□□□□ -0.44
COPS7A-207ENST00000538375 OR5H15A6NDH6 313 aa12.29□□□□□ -0.44
COPS7A-207ENST00000538375 GABRR3A8MPY1 467 aa12.29□□□□□ -0.44
COPS7A-207ENST00000538375 FCHO1O14526 889 aa12.29□□□□□ -0.44
COPS7A-207ENST00000538375 PIP5K1BO14986 540 aa12.29□□□□□ -0.44
COPS7A-207ENST00000538375 DRD2P14416 443 aa12.29□□□□□ -0.44
COPS7A-207ENST00000538375 PORP16435 677 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms