RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ERI3O43414 337 aaKnown RBP13.27□□□□□ -0.29
LIMK1-208ENST00000538333 CLPXO76031 633 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 CCNB2O95067 398 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 HOXB2P14652 356 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 HIST1H1TP22492 207 aaPredicted RBP13.27□□□□□ -0.29
LIMK1-208ENST00000538333 TEKQ02763 1124 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 DLX2Q07687 328 aaPredicted RBP13.27□□□□□ -0.29
LIMK1-208ENST00000538333 ZNF829Q3KNS6 432 aaPredicted RBP13.27□□□□□ -0.29
LIMK1-208ENST00000538333 ZNF425Q6IV72 752 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 TCTN3Q6NUS6 607 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 CCDC81Q6ZN84 652 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 SLC44A2Q8IWA5 706 aaPredicted RBP13.27□□□□□ -0.29
LIMK1-208ENST00000538333 DNAJC22Q8N4W6 341 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 PHF10Q8WUB8 498 aaKnown RBP13.27□□□□□ -0.29
LIMK1-208ENST00000538333 ALPK1Q96QP1 1244 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 RHCGQ9UBD6 479 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
LIMK1-208ENST00000538333 SPTBN5Q9NRC6 3674 aaKnown RBP13.26□□□□□ -0.29
LIMK1-208ENST00000538333 A0A1W2PR48 441 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 OR2A25A4D2G3 310 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ANHXE9PGG2 379 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 PDE9AO76083 593 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ZBTB11O95625 1053 aaPredicted RBP13.26□□□□□ -0.29
LIMK1-208ENST00000538333 EML2O95834 649 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 EGFP01133 1207 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 HOXC4P09017 264 aaPredicted RBP13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ATP5A1P25705 553 aaKnown RBP13.26□□□□□ -0.29
LIMK1-208ENST00000538333 CTHP32929 405 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 SLC19A1P41440 591 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 KCNJ5P48544 419 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 BMXP51813 675 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ARFIP1P53367 373 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 KIAA1024LP59773 190 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ADAM15Q13444 863 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 SLC9A5Q14940 896 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 COLEC12Q5KU26 742 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 UBE2UQ5VVX9 321 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 SDE2Q6IQ49 451 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ACOT4Q8N9L9 421 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 TMEM145Q8NBT3 493 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 DENND6BQ8NEG7 585 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 OR2L5Q8NG80 312 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 OR8K5Q8NH50 307 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ASB12Q8WXK4 309 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 DHRS1Q96LJ7 313 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 OR2M4Q96R27 311 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 TREX2Q9BQ50 279 aaPredicted RBP13.26□□□□□ -0.29
LIMK1-208ENST00000538333 FAIM2Q9BWQ8 316 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 OR51I1Q9H343 314 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ZNF556Q9HAH1 456 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 NMNAT1Q9HAN9 279 aaPredicted RBP13.26□□□□□ -0.29
LIMK1-208ENST00000538333 SLC28A3Q9HAS3 691 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ZSCAN32Q9NX65 697 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 TBC1D29Q9UFV1 150 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 ATG4BQ9Y4P1 393 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 COL4A2P08572 1712 aa13.26□□□□□ -0.29
LIMK1-208ENST00000538333 TRBV4-1A0A0J9YWV2 114 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 SH3PXD2BA1X283 911 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 ANKRD33BA6NCL7 494 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 PGRMC2O15173 223 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 KLF8O95600 359 aaPredicted RBP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 GASTP01350 101 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 OR12D1P0DN82 309 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 PSMB9P28065 219 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 IDH2P48735 452 aaKnown RBP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 ST13P50502 369 aaKnown RBP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 SLAMF1Q13291 335 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 LRRC32Q14392 662 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 SYPL1Q16563 259 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 ANKDD1AQ495B1 522 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 KLHL17Q6TDP4 642 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 ZBTB46Q86UZ6 589 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 AQP11Q8NBQ7 271 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 OR4D11Q8NGI4 311 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 OR5D16Q8NGK9 328 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 SUN3Q8TAQ9 357 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 OR1E3Q8WZA6 343 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 BORCS5Q969J3 196 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 SLC35G5Q96KT7 338 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 ZNF354BQ96LW1 612 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 WFDC6Q9BQY6 131 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 COPS4Q9BT78 406 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 P2RX2Q9UBL9 471 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 FTSJ1Q9UET6 329 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 MSRAQ9UJ68 235 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 ACAD8Q9UKU7 415 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 HEBP2Q9Y5Z4 205 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 DSPPQ9NZW4 1301 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 GLOD5A6NK44 160 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 CLCA1A8K7I4 914 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 FAM227AF5H4B4 570 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 SLC22A1O15245 554 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 LCKP06239 509 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 POU2F1P14859 743 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 TGFBR2P37173 567 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.29
LIMK1-208ENST00000538333 CLDN2P57739 230 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 DUSP2Q05923 314 aa13.25□□□□□ -0.29
LIMK1-208ENST00000538333 DGCR6Q14129 220 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms