RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 LAS2Q8IYD9 372 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 CDCA3Q99618 268 aaPredicted RBP16.1■□□□□ 0.17
SCARB1-205ENST00000538291 KCNK13Q9HB14 408 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 MYOCOSA0A1B0GUC4 107 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 S1PR4O95977 384 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 ARL3P36405 182 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 MAGEA2P43356 314 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 DSC1Q08554 894 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 OR4C11Q6IEV9 310 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 RAB11FIP2Q7L804 512 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 LIX1LQ8IVB5 337 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 SGTBQ96EQ0 304 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 PIP5K1AQ99755 562 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 ZBTB20Q9HC78 741 aaPredicted RBP16.1■□□□□ 0.17
SCARB1-205ENST00000538291 GRXCR2A6NFK2 248 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 CDH15P55291 814 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 VMACQ2NL98 169 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 IGDCC3Q8IVU1 814 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 GPR137CQ8N3F9 429 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 AKAP1Q92667 903 aaKnown RBP eCLIP16.1■□□□□ 0.173e-8■■■■□ 20.7
SCARB1-205ENST00000538291 DIO2Q92813 273 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 RDH8Q9NYR8 311 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 GSKIPQ9P0R6 139 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 CLEC4EQ9ULY5 219 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 MYO5BQ9ULV0 1848 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 IFNA7P01567 189 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 FCER2P06734 321 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 IRF2P14316 349 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 PITX1P78337 314 aaPredicted RBP16.1■□□□□ 0.17
SCARB1-205ENST00000538291 TRAM1Q15629 374 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 CHRFAM7AQ494W8 412 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 PSAPL1Q6NUJ1 521 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 FIBINQ8TAL6 211 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 KATNBL1Q9H079 304 aa16.1■□□□□ 0.17
SCARB1-205ENST00000538291 GOLGA4Q13439 2230 aaKnown RBP16.1■□□□□ 0.17
SCARB1-205ENST00000538291 GNRHRP30968 328 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 FXYD6P3P58550 94 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 NSDHLQ15738 373 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 FIGLAQ6QHK4 219 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 APCDD1Q8J025 514 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 PROKR1Q8TCW9 393 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 WACQ9BTA9 647 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 ENAMQ9NRM1 1142 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 DHDHQ9UQ10 334 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 CMAHPQ9Y471 501 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 FEZF1A0PJY2 475 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 ADRB3P13945 408 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 PRKCAP17252 672 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 ARSFP54793 590 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 RAB15P59190 212 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 LRIT3Q3SXY7 679 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 SPAG16Q8N0X2 631 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 SNIP1Q8TAD8 396 aaKnown RBP16.09■□□□□ 0.17
SCARB1-205ENST00000538291 SARDHQ9UL12 918 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 KCNS2Q9ULS6 477 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 KCNIP3Q9Y2W7 256 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 FTCDNL1E5RQL4 147 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 XPNPEP2O43895 674 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 HMGCLP35914 325 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 SPINT3P49223 89 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 C6orf120Q7Z4R8 191 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 KRTCAP2Q8N6L1 136 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 FCRL3Q96P31 734 aaPredicted RBP16.09■□□□□ 0.17
SCARB1-205ENST00000538291 URM1Q9BTM9 101 aaKnown RBP16.09■□□□□ 0.17
SCARB1-205ENST00000538291 UCKL1Q9NWZ5 548 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 K7ERQ8 282 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 SEC14L5O43304 696 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 TIMP1P01033 207 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 STOMP27105 288 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 UBE2NP61088 152 aaKnown RBP16.09■□□□□ 0.17
SCARB1-205ENST00000538291 GALK2Q01415 458 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 KIAA0895LQ68EN5 471 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 RDH12Q96NR8 316 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 NSUN5Q96P11 429 aaKnown RBP16.09■□□□□ 0.17
SCARB1-205ENST00000538291 PAAF1Q9BRP4 392 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 MKS1Q9NXB0 559 aa16.09■□□□□ 0.17
SCARB1-205ENST00000538291 LRRN3E7EW58 273 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 CD3GP09693 182 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 SCAPQ12770 1279 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 RABEPKQ7Z6M1 372 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 CASTOR1Q8WTX7 329 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 NECAB3Q96P71 396 aaPredicted RBP16.08■□□□□ 0.17
SCARB1-205ENST00000538291 NELL2Q99435 816 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 STRA6Q9BX79 667 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 LRRN3Q9H3W5 708 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 GPRC5BQ9NZH0 403 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.08■□□□□ 0.17
SCARB1-205ENST00000538291 ROBO1Q9Y6N7 1651 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 ERCC1P07992 297 aaPredicted RBP16.08■□□□□ 0.17
SCARB1-205ENST00000538291 CNPY1Q3B7I2 92 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 ARSKQ6UWY0 536 aa16.08■□□□□ 0.17
SCARB1-205ENST00000538291 FGF3P11487 239 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-205ENST00000538291 NADK2Q4G0N4 442 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 HSD17B12Q53GQ0 312 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 PEX11GQ96HA9 241 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 TMEM68Q96MH6 324 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 CD207Q9UJ71 328 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 MKLN1Q9UL63 735 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 OR1A2Q9Y585 309 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 CICQ96RK0 1608 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms