RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ROPN1Q9HAT0 212 aaPredicted RBP7.81□□□□□ -1.16
SPARC-208ENST00000538026 BRF2Q9HAW0 419 aa7.81□□□□□ -1.16
SPARC-208ENST00000538026 MKS1Q9NXB0 559 aa7.81□□□□□ -1.16
SPARC-208ENST00000538026 HEY2Q9UBP5 337 aa7.81□□□□□ -1.16
SPARC-208ENST00000538026 GRID1Q9ULK0 1009 aa7.81□□□□□ -1.16
SPARC-208ENST00000538026 SLC12A4Q9UP95 1085 aa7.81□□□□□ -1.16
SPARC-208ENST00000538026 EXO1Q9UQ84 846 aaKnown RBP7.81□□□□□ -1.16
SPARC-208ENST00000538026 PTGDR2Q9Y5Y4 395 aa7.81□□□□□ -1.16
SPARC-208ENST00000538026 ABCA12Q86UK0 2595 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 CACNA1DQ01668 2161 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 SERTM1A2A2V5 107 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 DYTNA2CJ06 578 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 PINLYPA6NC86 204 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 C17orf105B2RV13 164 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 COPEO14579 308 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 ZNHIT1O43257 154 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 NADKO95544 446 aaPredicted RBP7.8□□□□□ -1.16
SPARC-208ENST00000538026 IFNA16P05015 189 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 CHRNGP07510 517 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 NR2F6P10588 404 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 MYL2P10916 166 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 ALDH3A1P30838 453 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 CCT5P48643 541 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 HLCSP50747 726 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 CLCN2P51788 898 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 HK2P52789 917 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 PKNOX1P55347 436 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 STX4Q12846 297 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 SERTAD2Q14140 314 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 KIAA0040Q15053 153 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 UGT3A2Q3SY77 523 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 CCDC153Q494R4 210 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 ZNF766Q5HY98 468 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 NDUFAF5Q5TEU4 345 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 TTC19Q6DKK2 380 aaPredicted RBP7.8□□□□□ -1.16
SPARC-208ENST00000538026 Q6ZSR9 355 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 NUDT13Q86X67 352 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 SIAH3Q8IW03 269 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 C9orf40Q8IXQ3 194 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 TMEM132CQ8N3T6 1108 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 SLC5A8Q8N695 610 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 CCNYL1Q8N7R7 359 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 MORN4Q8NDC4 146 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 OR14A16Q8NHC5 309 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.8□□□□□ -1.16
SPARC-208ENST00000538026 METTL6Q8TCB7 284 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 TCP10LQ8TDR4 215 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 VMP1Q96GC9 406 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 ZNF681Q96N22 645 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 DEFB126Q9BYW3 111 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 SLC29A3Q9BZD2 475 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 OR8D2Q9GZM6 311 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 TUBB1Q9H4B7 451 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 ELOVL6Q9H5J4 265 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 MID1IP1Q9NPA3 183 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 KLHL1Q9NR64 748 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 DEPPQ9NTK1 212 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 LYARQ9NX58 379 aaKnown RBP7.8□□□□□ -1.16
SPARC-208ENST00000538026 MS4A12Q9NXJ0 267 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 VPS29Q9UBQ0 182 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 PHF11Q9UIL8 331 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 ADAM29Q9UKF5 820 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 MRPS33Q9Y291 106 aaKnown RBP7.8□□□□□ -1.16
SPARC-208ENST00000538026 PCDHGB6Q9Y5F9 930 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 PCDHA9Q9Y5H5 950 aa7.8□□□□□ -1.16
SPARC-208ENST00000538026 NCOA6Q14686 2063 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 PKDREJQ9NTG1 2253 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 A0A0G2JMM0 328 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 A0A1W2PPB8 328 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 A0A1W2PRS3 328 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 BLACEA4D250 179 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 ASPDHA6ND91 283 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 WIPF3A6NGB9 483 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 KIR3DP1A8MWS1 328 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 TMEM233B4DJY2 109 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 WWP2O00308 870 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 VPS4BO75351 444 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 ULK1O75385 1050 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 NME6O75414 186 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 ITGA10O75578 1167 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 OR2J2O76002 312 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 ZFAND5O76080 213 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 OR6B1O95007 311 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 MLYCDO95822 493 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 SP1P08047 785 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 SLC35E2P0CK97 266 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 ALOX15P16050 662 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 ARL1P40616 181 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 SLC37A1P57057 533 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 KCNK10P57789 538 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 AP2B1P63010 937 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 RNF4P78317 190 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 UBAP2LQ14157 1087 aaKnown RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 CCNYL2Q5T2Q4 361 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 C10orf62Q5T681 223 aaPredicted RBP7.79□□□□□ -1.16
SPARC-208ENST00000538026 LIPMQ5VYY2 423 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 CLEC6AQ6EIG7 209 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 SLC25A25Q6KCM7 469 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 CYP20A1Q6UW02 462 aa7.79□□□□□ -1.16
SPARC-208ENST00000538026 TRIM46Q7Z4K8 759 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms