RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 PACSIN3Q9UKS6 424 aa11.62□□□□□ -0.55
DDB1-209ENST00000537877 ERVK-11Q9UQG0 969 aa11.62□□□□□ -0.55
DDB1-209ENST00000537877 TMEM184BQ9Y519 407 aaPredicted RBP11.62□□□□□ -0.55
DDB1-209ENST00000537877 A0A0C4DFX4 3053 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 RNF103-CHMP3A0A140T963 221 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 WASHC1A8K0Z3 465 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 B4E171 279 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 HYAL3O43820 417 aaPredicted RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 FGF17O60258 216 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 SCRG1O75711 98 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 SORBS2O94875 1100 aaKnown RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 FHP07954 510 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 CPMP14384 443 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 PORP16435 677 aaPredicted RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 GPX2P18283 190 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 TCN1P20061 433 aaPredicted RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 ALAS2P22557 587 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 GPC1P35052 558 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 CHI3L1P36222 383 aaPredicted RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 FEN1P39748 380 aaKnown RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 TSPAN7P41732 249 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 MAGEA8P43361 318 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 XCR1P46094 333 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 CDK9P50750 372 aaKnown RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 XKP51811 444 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 HSD17B7P56937 341 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 ACTR3P61158 418 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 MAT1AQ00266 395 aaKnown RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 INSM1Q01101 510 aaPredicted RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 MC2RQ01718 297 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 FOLH1Q04609 750 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 VAC14Q08AM6 782 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 FADDQ13158 208 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 FLOT2Q14254 428 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 KPNB1Q14974 876 aaKnown RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 FXNQ16595 210 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 SPDYE7PQ495Y7 208 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.61□□□□□ -0.55
DDB1-209ENST00000537877 ARHGAP40Q5TG30 622 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 CDCP2Q5VXM1 449 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 BHLHB9Q6PI77 547 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 SERPINA11Q86U17 422 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 CALHM3Q86XJ0 350 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 PTRH1Q86Y79 214 aaKnown RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 METTL27Q8N6F8 245 aaPredicted RBP11.61□□□□□ -0.55
DDB1-209ENST00000537877 C7orf57Q8NEG2 295 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 OR2T12Q8NG77 320 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 OR52N2Q8NGI0 321 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 WDR60Q8WVS4 1066 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 NEURL3Q96EH8 262 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 CMKLR1Q99788 373 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 ZNF304Q9HCX3 659 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 FBXO8Q9NRD0 319 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 PRTFDC1Q9NRG1 225 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 OCIAD1Q9NX40 245 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 MMACHCQ9Y4U1 282 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 SNX8Q9Y5X2 465 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 NUP210LQ5VU65 1888 aa11.61□□□□□ -0.55
DDB1-209ENST00000537877 SYNDIG1LA6NDD5 238 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 A8MUI8 341 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 FAM227AF5H4B4 570 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 ACOT8O14734 319 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 POLR1CO15160 346 aaPredicted RBP11.6□□□□□ -0.55
DDB1-209ENST00000537877 CTNSO60931 367 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 BCAS2O75934 225 aaPredicted RBP11.6□□□□□ -0.55
DDB1-209ENST00000537877 ATP1B1P05026 303 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 C8orf89P0DMQ9 161 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 IGLV3-21P80748 117 aaPredicted RBP11.6□□□□□ -0.55
DDB1-209ENST00000537877 DUSP2Q05923 314 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 BIKQ13323 160 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 TRIP6Q15654 476 aaKnown RBP11.6□□□□□ -0.55
DDB1-209ENST00000537877 SYT16Q17RD7 645 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 PRAMEF17Q5VTA0 474 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 SAXO2Q658L1 398 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 CPZQ66K79 652 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 PWWP2BQ6NUJ5 590 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 ERICH5Q6P6B1 374 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 IFNEQ86WN2 208 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 CCDC116Q8IYX3 515 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 FAM156AQ8NDB6 213 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 OR56A1Q8NGH5 318 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 OR10A6Q8NH74 314 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 COL26A1Q96A83 441 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 ANKRD9Q96BM1 317 aaPredicted RBP11.6□□□□□ -0.55
DDB1-209ENST00000537877 LIN37Q96GY3 246 aaPredicted RBP11.6□□□□□ -0.55
DDB1-209ENST00000537877 REXO5Q96IC2 774 aaKnown RBP11.6□□□□□ -0.55
DDB1-209ENST00000537877 ZNF583Q96ND8 569 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 DEPDC7Q96QD5 511 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 PELOQ9BRX2 385 aaKnown RBP11.6□□□□□ -0.55
DDB1-209ENST00000537877 TRIM15Q9C019 465 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 EPS8L2Q9H6S3 715 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 C3orf14Q9HBI5 128 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 MKKSQ9NPJ1 570 aaPredicted RBP11.6□□□□□ -0.55
DDB1-209ENST00000537877 TOR4AQ9NXH8 423 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 ACTR3BQ9P1U1 418 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 MAGEL2Q9UJ55 1249 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 SNX13Q9Y5W8 968 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 MAU2Q9Y6X3 613 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 MUC6Q6W4X9 2439 aa11.6□□□□□ -0.55
DDB1-209ENST00000537877 USP34Q70CQ2 3546 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms