RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 FOXK2Q01167 660 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 MLLT1Q03111 559 aaPredicted RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 CRHR2Q13324 411 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 GUCA2BQ16661 112 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 ACER2Q5QJU3 275 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 RAET1GQ6H3X3 334 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 LRRN1Q6UXK5 716 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 GSG1LQ6UXU4 331 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 NUDT18Q6ZVK8 323 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM122BQ7Z309 247 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 CIR1Q86X95 450 aaPredicted RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 DMRTC2Q8IXT2 367 aaPredicted RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 PUSL1Q8N0Z8 303 aaKnown RBP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 ARMC10Q8N2F6 343 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 PYROXD2Q8N2H3 581 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 OR56B4Q8NH76 319 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 KHSRPQ92945 711 aaKnown RBP eCLIP8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 C1GALT1C1Q96EU7 318 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 CACNG6Q9BXT2 260 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 WNT5BQ9H1J7 359 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 ACTL8Q9H568 366 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 SLC6A20Q9NP91 592 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 UBP1Q9NZI7 540 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 CLEC4AQ9UMR7 237 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 PIAS3Q9Y6X2 628 aa8.14□□□□□ -1.11
SRGAP1-202ENST00000537556 KRT33AO76009 404 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 AQP8O94778 261 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 CXCL14O95715 111 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 HEXAP06865 529 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SYPP08247 313 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 CBSLP0DN79 551 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 FOLR2P14207 255 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 CBSP35520 551 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ATXN1P54253 815 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RAB2AP61019 212 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RAP2BP61225 183 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ITPK1Q13572 414 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 KRT33BQ14525 404 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 UBXN2BQ14CS0 331 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 KIAA0040Q15053 153 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ZSWIM7Q19AV6 140 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM174BQ3ZCQ3 159 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 PLK5Q496M5 336 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RNLSQ5VYX0 342 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 OVOS1Q6IE37 1185 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 OTOP2Q7RTS6 562 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 LAPTM4BQ86VI4 370 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 CBLN2Q8IUK8 224 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SERPINA12Q8IW75 414 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 MSRB3Q8IXL7 192 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 NANOGP1Q8N7R0 232 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 GPR26Q8NDV2 337 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RXFP4Q8TDU9 374 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TM9SF4Q92544 642 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 GAS2L1Q99501 681 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 EDEM2Q9BV94 578 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 POLR1EQ9GZS1 481 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TCF7L1Q9HCS4 588 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ENAMQ9NRM1 1142 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 OR6C2Q9NZP2 312 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 METTL1Q9UBP6 276 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 FZD10Q9ULW2 581 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 HAS3O00219 553 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TXNL1O43396 289 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 PRKYO43930 277 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 PRAF2O60831 178 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 VTNP04004 478 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SEMG1P04279 462 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 MTHFD2P13995 350 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 CBR1P16152 277 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 CPEP16870 476 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 BPIP17213 487 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 CD53P19397 219 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RAB4AP20338 218 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 BTCP35070 178 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RGS4P49798 205 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 PDZK1IP1Q13113 114 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RAB33AQ14088 237 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 RBMS2Q15434 407 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 FAM187BQ17R55 369 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 UAP1L1Q3KQV9 507 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SYTL3Q4VX76 610 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 MFSD14BQ5SR56 506 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 SFRP5Q5T4F7 317 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TMEM91Q6ZNR0 172 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 Q6ZSR9 355 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 NAA40Q86UY6 237 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 OR56A4Q8NGH8 313 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 OR10K1Q8NGX5 313 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 STAG3L4Q8TBR4 150 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 METTL6Q8TCB7 284 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ACOT12Q8WYK0 555 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 PEX11GQ96HA9 241 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 MS4A3Q96HJ5 214 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ZBED3Q96IU2 234 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 ZC3H10Q96K80 434 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 OR4K3Q96R72 315 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 NEU1Q99519 415 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 TBL1YQ9BQ87 522 aa8.13□□□□□ -1.11
SRGAP1-202ENST00000537556 C11orf84Q9BUA3 381 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms