RNA–Protein interactions for RNA: ENST00000536852.1

MAP3K4-208, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 2

Gene MAP3K4, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-208	ENST00000536852	HOXC11	O43248	304 aa	Predicted RBP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	SLC28A2	O43868	658 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	OXSR1	O95747	527 aa	Predicted RBP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	PSMB5	P28074	263 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	CSTF2	P33240	577 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	OPRD1	P41143	372 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	SLC6A11	P48066	632 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	KCNJ5	P48544	419 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	CCR8	P51685	355 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	XK	P51811	444 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	PCBP4	P57723	403 aa	Known RBP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	ELAVL3	Q14576	367 aa	Known RBP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	SLX4IP	Q5VYV7	408 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	OR4D11	Q8NGI4	311 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	ZBED6CL	Q96FA7	236 aa	Predicted RBP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	CEP19	Q96LK0	163 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	PRAP1	Q96NZ9	151 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	QRFPR	Q96P65	431 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TRNT1	Q96Q11	434 aa	Known RBP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	ZNF607	Q96SK3	696 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	WFDC6	Q9BQY6	131 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	CNPPD1	Q9BV87	410 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	POLR2J3	Q9H1A7	115 aa	Known RBP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	PELI2	Q9HAT8	420 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TMEM165	Q9HC07	324 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	FZD3	Q9NPG1	666 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	SIRT3	Q9NTG7	399 aa	Predicted RBP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	CLEC2D	Q9UHP7	191 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	MKLN1	Q9UL63	735 aa		10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	MRPS23	Q9Y3D9	190 aa	Known RBP	10.91	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TCF20	Q9UGU0	1960 aa	Known RBP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	CTDSP2	O14595	271 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TMPRSS11D	O60235	418 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TBX19	O60806	448 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	SCG5	P05408	212 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	DDX5	P17844	614 aa	Known RBP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	SOX3	P41225	446 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	CCT3	P49368	545 aa	Known RBP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	RHAG	Q02094	409 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	RPA4	Q13156	261 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	DESI1	Q6ICB0	168 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	MMAA	Q8IVH4	418 aa	Known RBP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	CELF5	Q8N6W0	485 aa	Known RBP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	CXorf40A	Q8TE69	158 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	POF1B	Q8WVV4	589 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TMEM80	Q96HE8	168 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	ZFYVE19	Q96K21	471 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TEFM	Q96QE5	360 aa	Known RBP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TREX2	Q9BQ50	279 aa	Predicted RBP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	HHATL	Q9HCP6	504 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	LHX9	Q9NQ69	397 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TM7SF3	Q9NS93	570 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	TEX10	Q9NXF1	929 aa	Predicted RBP	10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852	EHD3	Q9NZN3	535 aa		10.9	□□□□□ -0.66
MAP3K4-208	ENST00000536852		A0A0G2JN53	185 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	PDZK1P1	A8MUH7	402 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	ERG	P11308	486 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	CTNNB1	P35222	781 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	ETV6	P41212	452 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	VIPR2	P41587	438 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	DEFA1	P59665	94 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	DEFA3	P59666	94 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	HTRA4	P83105	476 aa	Predicted RBP	10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	KRR1	Q13601	381 aa	Known RBP	10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	ARHGAP19	Q14CB8	494 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	SPHAR	Q15513	63 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	SYPL1	Q16563	259 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	LRRC26	Q2I0M4	334 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	TMEM52B	Q4KMG9	183 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	MEDAG	Q5VYS4	303 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	C12orf73	Q69YU5	71 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	PGBD2	Q6P3X8	592 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	ERN2	Q76MJ5	926 aa	Known RBP	10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	CCDC190	Q86UF4	302 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	AKAP14	Q86UN6	197 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	NUDT13	Q86X67	352 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	CACTIN-AS1	Q8N1I8	211 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	TCEANC	Q8N8B7	351 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	OR5K2	Q8NHB8	316 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	SLC7A13	Q8TCU3	470 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	XAGE5	Q8WWM1	108 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	UCN3	Q969E3	161 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	RSPRY1	Q96DX4	576 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	TXNDC15	Q96J42	360 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	DHRS1	Q96LJ7	313 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	ASPN	Q9BXN1	380 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	WASH6P	Q9NQA3	447 aa		10.9	□□□□□ -0.67
MAP3K4-208	ENST00000536852	NDUFS4	O43181	175 aa		10.89	□□□□□ -0.67
MAP3K4-208	ENST00000536852	OR1F1	O43749	312 aa		10.89	□□□□□ -0.67
MAP3K4-208	ENST00000536852	UGT2B17	O75795	530 aa		10.89	□□□□□ -0.67
MAP3K4-208	ENST00000536852	RPN2	P04844	631 aa		10.89	□□□□□ -0.67
MAP3K4-208	ENST00000536852	SERPIND1	P05546	499 aa		10.89	□□□□□ -0.67
MAP3K4-208	ENST00000536852	OR12D1	P0DN82	309 aa		10.89	□□□□□ -0.67
MAP3K4-208	ENST00000536852	TNNI3	P19429	210 aa		10.89	□□□□□ -0.67
MAP3K4-208	ENST00000536852	FRK	P42685	505 aa	Predicted RBP	10.89	□□□□□ -0.67
MAP3K4-208	ENST00000536852	VEGFB	P49765	207 aa		10.89	□□□□□ -0.67
MAP3K4-208	ENST00000536852	SMIM11A	P58511	58 aa		10.89	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms