RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 VMP1Q96GC9 406 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 DEFB126Q9BYW3 111 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 KLHL1Q9NR64 748 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 LRFN1Q9P244 771 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZNF225Q9UK10 706 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 DNAJC13O75165 2243 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SYNDIG1LA6NDD5 238 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TMEM114B3SHH9 223 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CDK2AP1O14519 115 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 UBFD1O14562 309 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PRKNO60260 465 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CRCPO75575 148 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CPN2P22792 545 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PTX3P26022 381 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MST1P26927 711 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 HMOX2P30519 316 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 RAP1GDS1P52306 607 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ARFIP1P53367 373 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PHEXP78562 749 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 OC90Q02509 493 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 STX3Q13277 289 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SLAMF1Q13291 335 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CUL3Q13618 768 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ARL13AQ5H913 290 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 C10orf62Q5T681 223 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ZCCHC7Q8N3Z6 543 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 DNAJB8Q8NHS0 232 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 RAB3IL1Q8TBN0 382 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 METTL6Q8TCB7 284 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 THAP3Q8WTV1 239 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PTPMT1Q8WUK0 201 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ANKRD9Q96BM1 317 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CENPKQ9BS16 269 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ELOVL6Q9H5J4 265 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TRIM45Q9H8W5 580 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PSD3Q9NYI0 1048 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PPT2Q9UMR5 302 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SNX6Q9UNH7 406 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SPACA6W5XKT8 324 aa16.64■□□□□ 0.25
TNFRSF1A-209ENST00000536717 WIPF3A6NGB9 483 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FOXE1O00358 373 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 EEDO75530 441 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SNUPNO95149 360 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 HSPA4LO95757 839 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 LDLRP01130 860 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 KRT6AP02538 564 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 KRT6BP04259 564 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 IFNA16P05015 189 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CD46P15529 392 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TRHRP34981 398 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 BSGP35613 385 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 KRT6CP48668 564 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ABCE1P61221 599 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ID2Q02363 134 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 STX4Q12846 297 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 IFT88Q13099 833 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FRG2Q64ET8 278 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ATG16L1Q676U5 607 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MRM1Q6IN84 353 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 GALNTL5Q7Z4T8 443 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 HOMEZQ8IX15 550 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TMEM132CQ8N3T6 1108 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FRG2BQ96QU4 278 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SHCBP1LQ9BZQ2 653 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ZNF407Q9C0G0 2248 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MANSC1Q9H8J5 431 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SLC5A6Q9Y289 635 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ATG4BQ9Y4P1 393 aa16.63■□□□□ 0.25
TNFRSF1A-209ENST00000536717 A0A0A6YYD5 115 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TMEM200CA6NKL6 621 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FGF17O60258 216 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PRKRAO75569 313 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 WISP2O76076 250 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CRYABP02511 175 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CHRNGP07510 517 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CYB561P49447 251 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 IGLV3-21P80748 117 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TNFRSF17Q02223 184 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SERTAD2Q14140 314 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 C18orf63Q68DL7 685 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 GPR180Q86V85 440 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 DAZLQ92904 295 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MTFMTQ96DP5 389 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 DDX31Q9H8H2 851 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MS4A12Q9NXJ0 267 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 OSGIN2Q9Y236 505 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CLCA3PQ9Y6N3 262 aa16.62■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ASPDHA6ND91 283 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FCHO1O14526 889 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TMPRSS11DO60235 418 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SLC25A12O75746 678 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 DDAH2O95865 285 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SP1P08047 785 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 GP1BBP13224 206 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SLC1A6P48664 564 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 KCNK10P57789 538 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 BST1Q10588 318 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FAM219BQ5XKK7 198 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SLC25A25Q6KCM7 469 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms