RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 ZBED6CLQ96FA7 236 aaPredicted RBP17.27■□□□□ 0.36
HTATSF1-204ENST00000535601 SDC3O75056 442 aa17.27■□□□□ 0.35
HTATSF1-204ENST00000535601 CLK3P49761 638 aaKnown RBP17.27■□□□□ 0.35
HTATSF1-204ENST00000535601 TEAD4Q15561 434 aa17.27■□□□□ 0.35
HTATSF1-204ENST00000535601 GPR153Q6NV75 609 aa17.27■□□□□ 0.35
HTATSF1-204ENST00000535601 FIGLAQ6QHK4 219 aa17.27■□□□□ 0.35
HTATSF1-204ENST00000535601 HIPK1Q86Z02 1210 aa17.27■□□□□ 0.35
HTATSF1-204ENST00000535601 BPIFB6Q8NFQ5 453 aa17.27■□□□□ 0.35
HTATSF1-204ENST00000535601 NEURL3Q96EH8 262 aa17.27■□□□□ 0.35
HTATSF1-204ENST00000535601 DDX18Q9NVP1 670 aaKnown RBP17.27■□□□□ 0.35
HTATSF1-204ENST00000535601 C5orf58C9J3I9 102 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 PCDH17O14917 1159 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 CASC3O15234 703 aaKnown RBP17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 SLC28A2O43868 658 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 TPST2O60704 377 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 DNAJA1P31689 397 aaKnown RBP17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 MC3RP41968 323 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 RPS6KA3P51812 740 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 ITGA1P56199 1179 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 PMS2P3Q13401 168 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 ADPRMQ3LIE5 342 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 THAP5Q7Z6K1 395 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 ASB12Q8WXK4 309 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 RBM38Q9H0Z9 239 aaKnown RBP17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 SNX7Q9UNH6 387 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 COLQQ9Y215 455 aaPredicted RBP17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 RP1P56715 2156 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 SPTY2D1-AS1A0A0U1RR47 76 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 BCKDKO14874 412 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 KCNJ13O60928 360 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 PCSK2P16519 638 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 ABATP80404 500 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 FADDQ13158 208 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 PUM1Q14671 1186 aaKnown RBP eCLIP17.26■□□□□ 0.355e-7■■■□□ 17.1
HTATSF1-204ENST00000535601 EXOC3L2Q2M3D2 409 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 PJA1Q8NG27 643 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 PRR14Q9BWN1 585 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 NAA50Q9GZZ1 169 aaKnown RBP17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 POLR1BQ9H9Y6 1135 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 TRNAU1APQ9NX07 287 aaKnown RBP17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 CDC14AQ9UNH5 594 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 THADAQ6YHU6 1953 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 AGRPO00253 132 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 WNT1P04628 370 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 FPR1P21462 350 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 CD6P30203 668 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 IFI44LQ53G44 452 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 ASPGQ86U10 573 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 LACC1Q8IV20 430 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 CHDHQ8NE62 594 aaPredicted RBP17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 COL21A1Q96P44 957 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 FEVQ99581 238 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 RBCK1Q9BYM8 510 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 KRT84Q9NSB2 600 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 C3orf18Q9UK00 162 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 LYVE1Q9Y5Y7 322 aa17.26■□□□□ 0.35
HTATSF1-204ENST00000535601 H0YAE9 185 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 TNFRSF11BO00300 401 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 HOXC4P09017 264 aaPredicted RBP17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 C7P10643 843 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 RABIFP47224 123 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 KCTD8Q6ZWB6 473 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 PARP8Q8N3A8 854 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 SLC5A8Q8N695 610 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 TTLQ8NG68 377 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 OR4D11Q8NGI4 311 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 UTP15Q8TED0 518 aaKnown RBP17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 OR2A5Q96R48 311 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 PRO3102Q9H379 93 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 TMEM38AQ9H6F2 299 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 IL21RQ9HBE5 538 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 PCOLCE2Q9UKZ9 415 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 ORC6Q9Y5N6 252 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 CEPT1Q9Y6K0 416 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 FAM170BA6NMN3 283 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 SEMA7AO75326 666 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 HMGN2P05204 90 aaKnown RBP17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 JUNDP17535 347 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 AHRP35869 848 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 ARHGDIAP52565 204 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 REEP3Q6NUK4 255 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 ZBTB46Q86UZ6 589 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 PIK3C3Q8NEB9 887 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 GPR32P1Q8NGA4 272 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 NIPSNAP1Q9BPW8 284 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 ORAI3Q9BRQ5 295 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 USE1Q9NZ43 259 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 ANKMY1Q9P2S6 941 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 ANGPT4Q9Y264 503 aa17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 ARID1BQ8NFD5 2236 aaPredicted RBP17.25■□□□□ 0.35
HTATSF1-204ENST00000535601 TNFRSF10CO14798 259 aa17.24■□□□□ 0.35
HTATSF1-204ENST00000535601 HPRP00739 348 aa17.24■□□□□ 0.35
HTATSF1-204ENST00000535601 LIM2P55344 173 aa17.24■□□□□ 0.35
HTATSF1-204ENST00000535601 PCBP3P57721 371 aaKnown RBP17.24■□□□□ 0.35
HTATSF1-204ENST00000535601 ZNF630Q2M218 657 aaPredicted RBP17.24■□□□□ 0.35
HTATSF1-204ENST00000535601 CCDC71Q8IV32 467 aaPredicted RBP17.24■□□□□ 0.35
HTATSF1-204ENST00000535601 GTPBP3Q969Y2 492 aaKnown RBP17.24■□□□□ 0.35
HTATSF1-204ENST00000535601 ARSGQ96EG1 525 aa17.24■□□□□ 0.35
HTATSF1-204ENST00000535601 SLC35G5Q96KT7 338 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms