RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 LINC00032P0C843 101 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 TNNI3P19429 210 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 BGNP21810 368 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 CLCN2P51788 898 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 ABCE1P61221 599 aaKnown RBP21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 PLIN5Q00G26 463 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 KIAA0040Q15053 153 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 PLEKHN1Q494U1 663 aaPredicted RBP21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 HHATQ5VTY9 493 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 SLC48A1Q6P1K1 146 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 PRICKLE2Q7Z3G6 844 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 ST13P4Q8IZP2 240 aaPredicted RBP21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 LGI4Q8N135 537 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 FAM76AQ8TAV0 307 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 C16orf78Q8WTQ4 265 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 HAS2Q92819 552 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 METTL2AQ96IZ6 378 aaKnown RBP21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 SH3GL2Q99962 352 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 PAIP2Q9BPZ3 127 aaKnown RBP21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 FAIM2Q9BWQ8 316 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 C20orf27Q9GZN8 174 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 RNF32Q9H0A6 362 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 EPN3Q9H201 632 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 VIPAS39Q9H9C1 493 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 STMN3Q9NZ72 180 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 HEY2Q9UBP5 337 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 DLGAP4Q9Y2H0 992 aa21.18■□□□□ 0.98
SFSWAP-204ENST00000535399 GNG14A0A1W2PPG7 69 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 RGS14O43566 566 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 WDPCPO95876 746 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 IL3P08700 152 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 SLC35E2P0CK97 266 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 NEFHP12036 1026 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 COX7A2P14406 83 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 GRK2P25098 689 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 MEP1AQ16819 746 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 ZNF605Q86T29 641 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 BEST3Q8N1M1 668 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 ARMC10Q8N2F6 343 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 ZNF321PQ8N8H1 164 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 CATSPER1Q8NEC5 780 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 OR4K14Q8NGD5 310 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 OR1N1Q8NGS0 311 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 SLC2A12Q8TD20 617 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 RBM18Q96H35 190 aaKnown RBP21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 PELOQ9BRX2 385 aaKnown RBP21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 DEFB126Q9BYW3 111 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 OR8D2Q9GZM6 311 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 CDCP1Q9H5V8 836 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 LRTM1Q9HBL6 345 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 C1orf109Q9NX04 203 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 LUZP4Q9P127 313 aa21.17■□□□□ 0.98
SFSWAP-204ENST00000535399 DYTNA2CJ06 578 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 PIP5K1BO14986 540 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 SLC28A2O43868 658 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 PRKNO60260 465 aaPredicted RBP21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 OR10H2O60403 315 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 HSPA4LO95757 839 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 ANXA4P09525 319 aaPredicted RBP21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 PIK3R1P27986 724 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 GALNSP34059 522 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 ARG2P78540 354 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 ZNF750Q32MQ0 723 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 RPS19BP1Q86WX3 136 aaKnown RBP21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 DDIASQ8IXT1 998 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 MGARPQ8TDB4 240 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 ZNF721Q8TF20 911 aa21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 SENP5Q96HI0 755 aaPredicted RBP21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 POLR3HQ9Y535 204 aaPredicted RBP21.16■□□□□ 0.98
SFSWAP-204ENST00000535399 HRKO00198 91 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 LSM1O15116 133 aaKnown RBP21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 F10P00742 488 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 DRD2P14416 443 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 GSTM5P46439 218 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 SLC1A6P48664 564 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 XKP51811 444 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 MLF1P58340 268 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 ZNF763Q0D2J5 394 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 STX3Q13277 289 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 NR6A1Q15406 480 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 SPRED3Q2MJR0 410 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 TTMPQ5BVD1 217 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 NOXRED1Q6NXP6 359 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 DOK4Q8TEW6 326 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 FCRL1Q96LA6 429 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 ATP6V1G3Q96LB4 118 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 SORT1Q99523 831 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 NKIRAS1Q9NYS0 192 aa21.15■□□□□ 0.98
SFSWAP-204ENST00000535399 SPENQ96T58 3664 aaKnown RBP21.14■□□□□ 0.98
SFSWAP-204ENST00000535399 SEC22BO75396 215 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 ZFAND5O76080 213 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 IGKV3-11P04433 115 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 CPMP14384 443 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 ALDH9A1P49189 494 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 TNFSF10P50591 281 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 BST1Q10588 318 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 TLR1Q15399 786 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 XKR7Q5GH72 579 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 ZNF781Q8N8C0 355 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms