RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 FAM72AQ5TYM5 149 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 FAM72DQ6L9T8 149 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 FAM72BQ86X60 149 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 GPR137CQ8N3F9 429 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 FTMTQ8N4E7 242 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 STOML3Q8TAV4 291 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 ADAMTS18Q8TE60 1221 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 HS6ST2Q96MM7 605 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 PIP5K1AQ99755 562 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 SCGB2A1O75556 95 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 BEST1O76090 585 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 UGT2B10P36537 528 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 SUOXP51687 545 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 AIMP2Q13155 320 aaKnown RBP17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 PON2Q15165 354 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 CES4AQ5XG92 561 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 KRTCAP2Q8N6L1 136 aa17.41■□□□□ 0.38
SFSWAP-203ENST00000535236 ZNF217O75362 1048 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 STC2O76061 302 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 YES1P07947 543 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 PORP16435 677 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 ZNF404Q494X3 552 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 C16orf70Q9BSU1 422 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 TMEM14AQ9Y6G1 99 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 hCG_1807616A0A1W2PRN6 198 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 VSTM2BA6NLU5 285 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 SEC14L5O43304 696 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 AK1P00568 194 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 JUPP14923 745 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 ATF4P18848 351 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 NAA10P41227 235 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 DIO3P55073 304 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 HNRNPA0Q13151 305 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 MPP2Q14168 576 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 NANOGP8Q6NSW7 305 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 ZNF584Q8IVC4 421 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 SCGB1C1Q8TD33 95 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 SGTBQ96EQ0 304 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 RADILQ96JH8 1075 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 URM1Q9BTM9 101 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 DOHHQ9BU89 302 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 ATG5Q9H1Y0 275 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 NANOGQ9H9S0 305 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 J3QRK9 145 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 NPC1O15118 1278 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 LATS1O95835 1130 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 RGS19P49795 217 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 GSTM4Q03013 218 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 TMEM35AQ53FP2 167 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 OR4C11Q6IEV9 310 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 NXPE4Q6UWF7 544 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 PLD6Q8N2A8 252 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 TOR1AIP2Q8NFQ8 470 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 PLEKHO2Q8TD55 490 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 KCNK13Q9HB14 408 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 SRA1Q9HD15 236 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 BHMG1C9JSJ3 638 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 SOCS2O14508 198 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 PET100P0DJ07 73 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 RORAP35398 523 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 PLEKHN1Q494U1 663 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 ZNF440Q8IYI8 595 aa17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 ZBTB20Q9HC78 741 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-203ENST00000535236 DRD2P14416 443 aa17.39■□□□□ 0.38
SFSWAP-203ENST00000535236 AK4P27144 223 aaPredicted RBP17.39■□□□□ 0.38
SFSWAP-203ENST00000535236 RAB15P59190 212 aa17.39■□□□□ 0.38
SFSWAP-203ENST00000535236 ARHGAP12Q8IWW6 846 aa17.39■□□□□ 0.38
SFSWAP-203ENST00000535236 SORCS1Q8WY21 1168 aa17.39■□□□□ 0.38
SFSWAP-203ENST00000535236 FTCDNL1E5RQL4 147 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 DLGAP1O14490 977 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 ABCB7O75027 752 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 ATE1O95260 518 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 UBE2NP61088 152 aaKnown RBP17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 PHC1P78364 1004 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 TPSD1Q9BZJ3 242 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 TTLL8A6PVC2 850 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 FRKP42685 505 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 JAG1P78504 1218 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 PTGR1Q14914 329 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 PPP1R3AQ16821 1122 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 OR5J2Q8NH18 312 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 RHEBL1Q8TAI7 183 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF431Q8TF32 576 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 ZDHHC1Q8WTX9 485 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 TSPEARQ8WU66 669 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 DIO2Q92813 273 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 NELFAQ9H3P2 528 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 ABCG2Q9UNQ0 655 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 GPR37L1O60883 481 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 MAGEA8P43361 318 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 FASLGP48023 281 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 CRYZQ08257 329 aaKnown RBP17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 EXOC3L2Q2M3D2 409 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 UGT3A2Q3SY77 523 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 LRFN4Q6PJG9 635 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF773Q6PK81 442 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 MT-ND2P03891 347 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 HBQ1P09105 142 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 GTF2F2P13984 249 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms