RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FAM114A1Q8IWE2 563 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 PEX5LQ8IYB4 626 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 IQCKQ8N0W5 287 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 SIX6OS1Q8N1H7 587 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 HDDC3Q8N4P3 179 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 MINDY1Q8N5J2 469 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 DEFB123Q8N688 67 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 C4orf32Q8N8J7 132 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 TC2NQ8N9U0 490 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 FIBINQ8TAL6 211 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 HCAR2Q8TDS4 363 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 KCNE4Q8WWG9 221 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 HSD17B8Q92506 261 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 HDAC11Q96DB2 347 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 RPGRIP1Q96KN7 1286 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 FAM81BQ96LP2 452 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 TMEM237Q96Q45 408 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 MTMR9Q96QG7 549 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 OR6C1Q96RD1 312 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 MYADMQ96S97 322 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 TSC22D3Q99576 134 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 RIT2Q99578 217 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 CGREF1Q99674 301 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 LLPHQ9BRT6 129 aaKnown RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 BTBD10Q9BSF8 475 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 ZNF577Q9BSK1 485 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 MLPHQ9BV36 600 aaPredicted RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 VN1R1Q9GZP7 353 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 GFRA4Q9GZZ7 299 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 MMP27Q9H306 513 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 ACKR4Q9NPB9 350 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.09□□□□□ -1.91
USP48-215ENST00000534705 ERAP1Q9NZ08 941 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 TBC1D7Q9P0N9 293 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 IL19Q9UHD0 177 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 KCNK7Q9Y2U2 307 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 PTRH2Q9Y3E5 179 aaKnown RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 BZW2Q9Y6E2 419 aaKnown RBP3.09□□□□□ -1.91
USP48-215ENST00000534705 NRCAMQ92823 1304 aa3.09□□□□□ -1.91
USP48-215ENST00000534705 ZNF318Q5VUA4 2279 aa3.09□□□□□ -1.92
USP48-215ENST00000534705 PATJQ8NI35 1801 aa3.09□□□□□ -1.92
USP48-215ENST00000534705 COL1A2P08123 1366 aa3.09□□□□□ -1.92
USP48-215ENST00000534705 TTC28Q96AY4 2481 aa3.09□□□□□ -1.92
USP48-215ENST00000534705 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 IGKV6-21A0A0C4DH24 114 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 IGKV3D-20A0A0C4DH25 116 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 GOLGA6L7A0A1B0GV03 622 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 A0A1B0GVL5 298 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 A4D1N5 150 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 TMEM150BA6NC51 233 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 URADA6NGE7 173 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 SIGLEC16A6NMB1 481 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 RSPH10B2B2RC85 870 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 GOLGA6L19H0YKK7 550 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 AVILO75366 819 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 KIAA0754O94854 1291 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ANP32DO95626 131 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 OLFM2O95897 454 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 EDN1P05305 212 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 HEXBP07686 556 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 GSTA2P09210 222 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 RSPH10BP0C881 870 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ZNF883P0CG24 379 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ACP2P11117 423 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 AZU1P20160 251 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 EFNA1P20827 205 aaPredicted RBP3.08□□□□□ -1.92
USP48-215ENST00000534705 CASP3P42574 277 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 MTHFRP42898 656 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 MATR3P43243 847 aaKnown RBP eCLIP3.08□□□□□ -1.92
USP48-215ENST00000534705 NPY4RP50391 375 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 SLC26A2P50443 739 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 RAB28P51157 221 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 GPC3P51654 580 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 PSMD7P51665 324 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 TKTL1P51854 596 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 STX1BP61266 288 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 GNGT1P63211 74 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 CTAG1AP78358 180 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 KCNJ10P78508 379 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 PRKCEQ02156 737 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 LGALS3BPQ08380 585 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 PRKAA1Q13131 559 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 GPR17Q13304 367 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 SPCS2Q15005 226 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 MEP1BQ16820 701 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 HYAL4Q2M3T9 481 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 LETM2Q2VYF4 491 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 TTMPQ5BVD1 217 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 MPP7Q5T2T1 576 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 ETFRF1Q6IPR1 90 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 NEPROQ6NW34 567 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 LDB1Q86U70 411 aaPredicted RBP3.08□□□□□ -1.92
USP48-215ENST00000534705 KBTBD6Q86V97 674 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 CEP57Q86XR8 500 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 LRRC49Q8IUZ0 686 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 TBC1D21Q8IYX1 336 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 SYCP3Q8IZU3 236 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 KIRREL3Q8IZU9 778 aa3.08□□□□□ -1.92
USP48-215ENST00000534705 MMGT1Q8N4V1 131 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms