RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCDC84-208ENST00000534656 CHCHD2Q9Y6H1 151 aaPredicted RBP12.78□□□□□ -0.36
CCDC84-208ENST00000534656 DNAJC13O75165 2243 aa12.77□□□□□ -0.36
CCDC84-208ENST00000534656 A6NNC1 897 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 HRKO00198 91 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 SAP18O00422 153 aaKnown RBP12.77□□□□□ -0.37
CCDC84-208ENST00000534656 PHGDHO43175 533 aaKnown RBP12.77□□□□□ -0.37
CCDC84-208ENST00000534656 SH3BGRLO75368 114 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 PIAS1O75925 651 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 FBXO45P0C2W1 286 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 PCNAP12004 261 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 TCP1P17987 556 aaKnown RBP12.77□□□□□ -0.37
CCDC84-208ENST00000534656 SERPINB1P30740 379 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 TRPC1P48995 793 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 ASCL1P50553 236 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 PLIN5Q00G26 463 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 CBLBQ13191 982 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 SLAMF1Q13291 335 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 FLYWCH1Q4VC44 716 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 DEPDC1Q5TB30 811 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 KHDRBS2Q5VWX1 349 aaKnown RBP12.77□□□□□ -0.37
CCDC84-208ENST00000534656 OR4C11Q6IEV9 310 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 MED27Q6P2C8 311 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 CDC20BQ86Y33 519 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 LIX1Q8N485 282 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 FAM13CQ8NE31 585 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 OR7G3Q8NG95 312 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 FAM222BQ8WU58 562 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 TANKQ92844 425 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 LRRC46Q96FV0 321 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 CMTM7Q96FZ5 175 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 ALPK1Q96QP1 1244 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 SH3GL2Q99962 352 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 PRM3Q9NNZ6 103 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 MS4A12Q9NXJ0 267 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 PLEKHA6Q9Y2H5 1048 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 SPG11Q96JI7 2443 aa12.77□□□□□ -0.37
CCDC84-208ENST00000534656 IQANK1A0A1B0GTG1 560 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 AHRRA9YTQ3 701 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 DVL2O14641 736 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 EPPINO95925 133 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 C1QAP02745 245 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 S100BP04271 92 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 ALOX15P16050 662 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 STMN1P16949 149 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 BMP5P22003 454 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 SERPINB3P29508 390 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 CEACAM8P31997 349 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 PCDH1Q08174 1060 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 FOXD4Q12950 439 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 FBXL19-AS1Q494R0 122 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 SLC29A4Q7RTT9 530 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 LRRC70Q7Z2Q7 622 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 GPR180Q86V85 440 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 ZBED8Q8IZ13 594 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 ST13P4Q8IZP2 240 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 NAXEQ8NCW5 288 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 TNIP2Q8NFZ5 429 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 OR10G3Q8NGC4 313 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 RNASE6Q93091 150 aaKnown RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 RGMAQ96B86 450 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 UBXN10Q96LJ8 280 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 JSRP1Q96MG2 331 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 GPR22Q99680 433 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 SORBS1Q9BX66 1292 aaKnown RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 TRIM31Q9BZY9 425 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 OR51B5Q9H339 312 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 DMRT3Q9NQL9 472 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 DLL4Q9NR61 685 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 ZNF629Q9UEG4 869 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 CNOT11Q9UKZ1 510 aaKnown RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 RNF112Q9ULX5 631 aa12.76□□□□□ -0.37
CCDC84-208ENST00000534656 PRRC2AP48634 2157 aaKnown RBP12.76□□□□□ -0.37
CCDC84-208ENST00000534656 ANKRD33BA6NCL7 494 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 CXorf49A8MYA2 514 aaPredicted RBP12.75□□□□□ -0.37
CCDC84-208ENST00000534656 TRIM3O75382 744 aaPredicted RBP12.75□□□□□ -0.37
CCDC84-208ENST00000534656 FAM155BO75949 473 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 FOSL1P15407 271 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 GDF1P27539 372 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 TLX1P31314 330 aaPredicted RBP12.75□□□□□ -0.37
CCDC84-208ENST00000534656 TIMP3P35625 211 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 DGKQP52824 942 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 SLC37A1P57057 533 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 HERVK_113P63132 956 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 ERVK-8P63133 956 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 TNFRSF17Q02223 184 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 DUSP8Q13202 625 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 DAZAP2Q15038 168 aaPredicted RBP12.75□□□□□ -0.37
CCDC84-208ENST00000534656 NTRK2Q16620 822 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 SPRED3Q2MJR0 410 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 ACSF3Q4G176 576 aaPredicted RBP12.75□□□□□ -0.37
CCDC84-208ENST00000534656 TMEM198Q66K66 360 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 C18orf63Q68DL7 685 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 POMZP3Q6PJE2 187 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 RNF111Q6ZNA4 994 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 CAPN12Q6ZSI9 719 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 MAATS1Q7Z4T9 603 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 CAMKMTQ7Z624 323 aa12.75□□□□□ -0.37
CCDC84-208ENST00000534656 DOK4Q8TEW6 326 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms