RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 FBXL20Q96IG2 436 aa17.07■□□□□ 0.32
CTSB-233ENST00000534636 GAL3ST4Q96RP7 486 aa17.07■□□□□ 0.32
CTSB-233ENST00000534636 WDR41Q9HAD4 459 aa17.07■□□□□ 0.32
CTSB-233ENST00000534636 PNPLA3Q9NST1 481 aa17.07■□□□□ 0.32
CTSB-233ENST00000534636 RYDENQ9NUL5 291 aaKnown RBP17.07■□□□□ 0.32
CTSB-233ENST00000534636 LYARQ9NX58 379 aaKnown RBP17.07■□□□□ 0.32
CTSB-233ENST00000534636 ATG4BQ9Y4P1 393 aa17.07■□□□□ 0.32
CTSB-233ENST00000534636 C2CD3Q4AC94 2353 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 IQANK1A0A1B0GTG1 560 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 ATP6AP2A0A1C7CYW4 349 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 NKX2-6A6NCS4 301 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 AQP7O14520 342 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 ATP6AP2O75787 350 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 IGHG3P01860 377 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 NR2F6P10588 404 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 PTX3P26022 381 aaPredicted RBP17.06■□□□□ 0.32
CTSB-233ENST00000534636 PHBP35232 272 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 MAN2A2P49641 1150 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 NUP107P57740 925 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 RPS13P62277 151 aaKnown RBP17.06■□□□□ 0.32
CTSB-233ENST00000534636 KCNJ2P63252 427 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 IRF9Q00978 393 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 ACAP2Q15057 778 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 SLC22A10Q63ZE4 541 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 C18orf63Q68DL7 685 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 RNF111Q6ZNA4 994 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 TRILQ7L0X0 811 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 CDH24Q86UP0 819 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 C9orf40Q8IXQ3 194 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 CENPLQ8N0S6 344 aaPredicted RBP17.06■□□□□ 0.32
CTSB-233ENST00000534636 RNF175Q8N4F7 328 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 RPRMLQ8N4K4 120 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 SLC15A4Q8N697 577 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 ACBD4Q8NC06 268 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 PPWD1Q96BP3 646 aaKnown RBP17.06■□□□□ 0.32
CTSB-233ENST00000534636 SARAFQ96BY9 339 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 MRRFQ96E11 262 aaKnown RBP17.06■□□□□ 0.32
CTSB-233ENST00000534636 SPACA9Q96E40 222 aaPredicted RBP17.06■□□□□ 0.32
CTSB-233ENST00000534636 SNX15Q9NRS6 342 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 ACAD8Q9UKU7 415 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 BOKQ9UMX3 212 aaPredicted RBP17.06■□□□□ 0.32
CTSB-233ENST00000534636 TSC22D4Q9Y3Q8 395 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 TNPO3Q9Y5L0 923 aaKnown RBP17.06■□□□□ 0.32
CTSB-233ENST00000534636 HRH3Q9Y5N1 445 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 LIPGQ9Y5X9 500 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 NINQ8N4C6 2090 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 SPG11Q96JI7 2443 aa17.06■□□□□ 0.32
CTSB-233ENST00000534636 H0YIV9 168 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 SUSD5O60279 629 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 IGKV3-11P04433 115 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 C2P06681 752 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 MTHFD2P13995 350 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 MSX1P28360 303 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 SERPINB8P50452 374 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 HNRNPH2P55795 449 aaKnown RBP17.05■□□□□ 0.32
CTSB-233ENST00000534636 GTF2H2Q13888 395 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 SLC10A1Q14973 349 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 HYAL4Q2M3T9 481 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 EMC4Q5J8M3 183 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 WLSQ5T9L3 541 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 GTF2H2CQ6P1K8 395 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 B3GNT6Q6ZMB0 384 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 NUDT13Q86X67 352 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 CCDC71Q8IV32 467 aaPredicted RBP17.05■□□□□ 0.32
CTSB-233ENST00000534636 FAM13CQ8NE31 585 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 TREX2Q9BQ50 279 aaPredicted RBP17.05■□□□□ 0.32
CTSB-233ENST00000534636 SLC24A3Q9HC58 644 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 TUBA8Q9NY65 449 aaPredicted RBP17.05■□□□□ 0.32
CTSB-233ENST00000534636 CPSF2Q9P2I0 782 aaKnown RBP17.05■□□□□ 0.32
CTSB-233ENST00000534636 B4GALT7Q9UBV7 327 aa17.05■□□□□ 0.32
CTSB-233ENST00000534636 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.05■□□□□ 0.32
CTSB-233ENST00000534636 A0A096LPK6 155 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 A0A1B0GVC2 190 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 FAM47E-STBD1D6RA91 191 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 HCN1O60741 890 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 ZNF354AO60765 605 aaPredicted RBP17.04■□□□□ 0.32
CTSB-233ENST00000534636 WDR1O75083 606 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 PRKRAO75569 313 aaKnown RBP17.04■□□□□ 0.32
CTSB-233ENST00000534636 KLHL2O95198 593 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 POU3F2P20265 443 aaPredicted RBP17.04■□□□□ 0.32
CTSB-233ENST00000534636 SERPINB3P29508 390 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 TYK2P29597 1187 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 NR0B1P51843 470 aaKnown RBP17.04■□□□□ 0.32
CTSB-233ENST00000534636 HERVK_113P63132 956 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 ERVK-8P63133 956 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 CKAP4Q07065 602 aaKnown RBP17.04■□□□□ 0.32
CTSB-233ENST00000534636 ZNF267Q14586 743 aaPredicted RBP17.04■□□□□ 0.32
CTSB-233ENST00000534636 CPSF6Q16630 551 aaKnown RBP eCLIP17.04■□□□□ 0.32
CTSB-233ENST00000534636 SPRED3Q2MJR0 410 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 C8orf74Q6P047 294 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 ZDHHC24Q6UX98 284 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 GOLGA7Q7Z5G4 137 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 CLYBLQ8N0X4 340 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 TAGAPQ8N103 731 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 RIT1Q92963 219 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 ERVK-6Q9BXR3 956 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 UCK2Q9BZX2 261 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 IPPKQ9H8X2 491 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 ERVK-19Q9WJR5 959 aa17.04■□□□□ 0.32
CTSB-233ENST00000534636 HIVEP1P15822 2718 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms