RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 KCNC3Q14003 757 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 HNF4GQ14541 408 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 SMCO1Q147U7 214 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 SPA17Q15506 151 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 TAB1Q15750 504 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 ALG11Q2TAA5 492 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 ZFP69Q49AA0 526 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 RARS2Q5T160 578 aaKnown RBP4.03□□□□□ -1.76
ITGB1-219ENST00000534049 LRRC66Q68CR7 880 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 TCEAL6Q6IPX3 200 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 RAB12Q6IQ22 244 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 BHLHB9Q6PI77 547 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 SPSB3Q6PJ21 355 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 CLEC2AQ6UVW9 174 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 RTL4Q6ZR62 310 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 H1FNTQ75WM6 255 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-219ENST00000534049 RRM2BQ7LG56 351 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 FAM122BQ7Z309 247 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 ECHDC2Q86YB7 292 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 ENTHD1Q8IYW4 607 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 MAML2Q8IZL2 1156 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-219ENST00000534049 OR5T1Q8NG75 326 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 OR7G3Q8NG95 312 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 OR6Q1Q8NGQ2 317 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 HUS1BQ8NHY5 278 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 URGCPQ8TCY9 931 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 TRAPPC12Q8WVT3 735 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 POF1BQ8WVV4 589 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 UBLCP1Q8WVY7 318 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-219ENST00000534049 HDAC2Q92769 488 aaKnown RBP4.03□□□□□ -1.76
ITGB1-219ENST00000534049 OTULINQ96BN8 352 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 ISOC1Q96CN7 298 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 FAM122AQ96E09 287 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 SGTBQ96EQ0 304 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 FAM71F1Q96KD3 344 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-219ENST00000534049 LURAP1Q96LR2 239 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 SERPINI1Q99574 410 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 GSDMCQ9BYG8 508 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 PITPNM3Q9BZ71 974 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 ACPTQ9BZG2 426 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 RACGAP1Q9H0H5 632 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 OSGEPL1Q9H4B0 414 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 SMYD3Q9H7B4 428 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 MINDY3Q9H8M7 445 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 COG4Q9H9E3 785 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 JMJD4Q9H9V9 463 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 LIN28AQ9H9Z2 209 aaKnown RBP4.03□□□□□ -1.76
ITGB1-219ENST00000534049 PLEKHA2Q9HB19 425 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 BIN3Q9NQY0 253 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 DNAJC11Q9NVH1 559 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 COA4Q9NYJ1 87 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 NKIRAS1Q9NYS0 192 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 GDE1Q9NZC3 331 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 TMOD2Q9NZR1 351 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 VPS54Q9P1Q0 977 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 PLEKHB1Q9UF11 243 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-219ENST00000534049 EPHA6Q9UF33 1036 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 IL19Q9UHD0 177 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 HAO1Q9UJM8 370 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 ICAM5Q9UMF0 924 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 MGAT4BQ9UQ53 548 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 CRYL1Q9Y2S2 319 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 MFHAS1Q9Y4C4 1052 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 CLDN16Q9Y5I7 305 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 FKBP7Q9Y680 259 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 V9GYQ6 96 aa4.03□□□□□ -1.76
ITGB1-219ENST00000534049 DDX60Q8IY21 1712 aaKnown RBP4.03□□□□□ -1.76
ITGB1-219ENST00000534049 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-219ENST00000534049 hCG_1642624A0A1W2PR95 340 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 A0A1W2PRG0 241 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 TMEM120BA0PK00 339 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 RGSL1A5PLK6 1076 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 NCF1BA6NI72 391 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-219ENST00000534049 NCF1CA8MVU1 366 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-219ENST00000534049 LEUTXA8MZ59 168 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 H0YIN7 160 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 SCAMP1O15126 338 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 CLDN3O15551 220 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 HUS1O60921 280 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 LDB3O75112 727 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 TM7SF2O76062 418 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 RPP14O95059 124 aaKnown RBP4.02□□□□□ -1.77
ITGB1-219ENST00000534049 MFN2O95140 757 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 NSA2O95478 260 aaKnown RBP4.02□□□□□ -1.77
ITGB1-219ENST00000534049 H6PDO95479 791 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 UGT2B4P06133 528 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 HOXD4P09016 255 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-219ENST00000534049 SBK2P0C263 348 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 ACADMP11310 421 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 PSKH1P11801 424 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 LYL1P12980 280 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 MYF6P23409 242 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 PIK3R1P27986 724 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 C21orf33P30042 268 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-219ENST00000534049 AVPR2P30518 371 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 OXTRP30559 389 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 CASP3P42574 277 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 LIG4P49917 911 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 HNMTP50135 292 aa4.02□□□□□ -1.77
ITGB1-219ENST00000534049 YWHAGP61981 247 aaKnown RBP eCLIP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms