RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	CPSF4	O95639	269 aa	Known RBP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	NFATC1	O95644	943 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	LIMS3	P0CW19	117 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	LIMS4	P0CW20	117 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	C1GALT1C1L	P0DN25	315 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	DDC	P20711	480 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	PTBP1	P26599	531 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	AQP1	P29972	269 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	SERPINB1	P30740	379 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	TIE1	P35590	1138 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	MAPK9	P45984	424 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	PREP	P48147	710 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	SPIB	Q01892	262 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	IRF8	Q02556	426 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF544	Q6NX49	715 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	NXPE4	Q6UWF7	544 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ABI3BP	Q7Z7G0	1075 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ZER1	Q7Z7L7	766 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	RNF180	Q86T96	592 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	TBC1D19	Q8N5T2	526 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF354B	Q96LW1	612 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	RIPOR3	Q96MK2	946 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF582	Q96NG8	517 aa	Predicted RBP	4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	TCF25	Q9BQ70	676 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ASPN	Q9BXN1	380 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ZBP1	Q9H171	429 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ITM2C	Q9NQX7	267 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	PLSCR3	Q9NRY6	295 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	KIF17	Q9P2E2	1029 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	SEC14L4	Q9UDX3	406 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	SNX7	Q9UNH6	387 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	ENTPD4	Q9Y227	616 aa		4.19	□□□□□ -1.74
CTSC-208	ENST00000533897	CACNA1I	Q9P0X4	2223 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	C17orf113	A0A1B0GUU1	675 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897		A0A1W2PQ09	198 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	TRBC2	A0A5B9	178 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	MEIOC	A2RUB1	952 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	TBKBP1	A7MCY6	615 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	FAAH	O00519	579 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	POLR1C	O15160	346 aa	Predicted RBP	4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ALX3	O95076	343 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	GADD45G	O95257	159 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ACADM	P11310	421 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	GAL	P22466	123 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	TPD52	P55327	224 aa	Predicted RBP	4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	OR2B6	P58173	313 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	DPT	Q07507	201 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	EFR3A	Q14156	821 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	PLK5	Q496M5	336 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	MED27	Q6P2C8	311 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	XKRX	Q6PP77	449 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	LCTL	Q6UWM7	567 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	LIPI	Q6XZB0	460 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF730	Q6ZMV8	503 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ANKRD33	Q7Z3H0	272 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	PEX5L	Q8IYB4	626 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF740	Q8NDX6	193 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	OR52J3	Q8NH60	311 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	SUN3	Q8TAQ9	357 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	GLYATL1	Q969I3	302 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	TRIM63	Q969Q1	353 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	TMCO6	Q96DC7	493 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	TMEM80	Q96HE8	168 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ATF6B	Q99941	703 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ARHGAP9	Q9BRR9	750 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	MND1	Q9BWT6	205 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	PLA2G12A	Q9BZM1	189 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	NT5DC2	Q9H857	520 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	IL20RA	Q9UHF4	553 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	MGAT4B	Q9UQ53	548 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	DOCK9	Q9BZ29	2069 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897		G3V3Q6	166 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897		K7ESM1	405 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	SGK494	L7N484	410 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	PRICKLE3	O43900	615 aa	Predicted RBP	4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	GUCY1B2	O75343	617 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	HK1	P19367	917 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ALAS2	P22557	587 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	MMP11	P24347	488 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	METAP1	P53582	386 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	FXYD6P3	P58550	94 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	CYP4F8	P98187	520 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	FABP5	Q01469	135 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ACSM2A	Q08AH3	577 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	NAE1	Q13564	534 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	KRR1	Q13601	381 aa	Known RBP	4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	SPHAR	Q15513	63 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ZIC1	Q15915	447 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF77	Q15935	545 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	CCDC92	Q53HC0	331 aa	Predicted RBP	4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	LRRC73	Q5JTD7	316 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	CCNJ	Q5T5M9	372 aa		4.18	□□□□□ -1.74
CTSC-208	ENST00000533897	AADACL4	Q5VUY2	407 aa		4.18	□□□□□ -1.74

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