RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 EPS8L2Q9H6S3 715 aa18.52■□□□□ 0.56
CHEK1-215ENST00000533778 INTS9Q9NV88 658 aaKnown RBP18.52■□□□□ 0.56
CHEK1-215ENST00000533778 EHD3Q9NZN3 535 aa18.52■□□□□ 0.56
CHEK1-215ENST00000533778 PTGFRNQ9P2B2 879 aa18.52■□□□□ 0.56
CHEK1-215ENST00000533778 ZNF780BQ9Y6R6 833 aa18.52■□□□□ 0.56
CHEK1-215ENST00000533778 DPM1O60762 260 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 VPS4BO75351 444 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 CELA2AP08217 269 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 CSNK2A2P19784 350 aaPredicted RBP18.51■□□□□ 0.55
CHEK1-215ENST00000533778 CLCN2P51788 898 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 XKP51811 444 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 RPL38P63173 70 aaKnown RBP18.51■□□□□ 0.55
CHEK1-215ENST00000533778 PDCD2Q16342 344 aaPredicted RBP18.51■□□□□ 0.55
CHEK1-215ENST00000533778 RFTN2Q52LD8 501 aaPredicted RBP18.51■□□□□ 0.55
CHEK1-215ENST00000533778 LRRC8CQ8TDW0 803 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 ELP5Q8TE02 316 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 PTPMT1Q8WUK0 201 aaPredicted RBP18.51■□□□□ 0.55
CHEK1-215ENST00000533778 PSMF1Q92530 271 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 UCN3Q969E3 161 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 TUBGCP3Q96CW5 907 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 FCRL1Q96LA6 429 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 BBC3Q96PG8 261 aaPredicted RBP18.51■□□□□ 0.55
CHEK1-215ENST00000533778 MYNNQ9NPC7 610 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 MED4Q9NPJ6 270 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 GIMAP4Q9NUV9 329 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 UTS2RQ9UKP6 389 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 CES1P1Q9UKY3 287 aa18.51■□□□□ 0.55
CHEK1-215ENST00000533778 CCDC88CQ9P219 2028 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 NUP210LQ5VU65 1888 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 MYOCOSA0A1B0GUC4 107 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 WASHC1A8K0Z3 465 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 A8MUI8 341 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 PEX11AO75192 247 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 PORP16435 677 aaPredicted RBP18.5■□□□□ 0.55
CHEK1-215ENST00000533778 NR1D1P20393 614 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 DDCP20711 480 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 HK2P52789 917 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 C2orf80Q0P641 193 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 MAD2L1Q13257 205 aaPredicted RBP18.5■□□□□ 0.55
CHEK1-215ENST00000533778 MFAP5Q13361 173 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 SMU1Q2TAY7 513 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 C6orf163Q5TEZ5 329 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 ABHD17BQ5VST6 288 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 H3F3CQ6NXT2 135 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 IGFL3Q6UXB1 125 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 ZADH2Q8N4Q0 377 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 SIRT6Q8N6T7 355 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 CDC26Q8NHZ8 85 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 RIT1Q92963 219 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 KLHL29Q96CT2 875 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 ZNF354BQ96LW1 612 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 C3orf30Q96M34 536 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 MIEF1Q9NQG6 463 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 PNPOQ9NVS9 261 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 ABI3Q9P2A4 366 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 COPS7AQ9UBW8 275 aa18.5■□□□□ 0.55
CHEK1-215ENST00000533778 ATP6AP2A0A1C7CYW4 349 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 TRPC5OSA6NMA1 111 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 ERAL1O75616 437 aaKnown RBP18.49■□□□□ 0.55
CHEK1-215ENST00000533778 ATP6AP2O75787 350 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 CPMP14384 443 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 DDX5P17844 614 aaKnown RBP18.49■□□□□ 0.55
CHEK1-215ENST00000533778 SOX11P35716 441 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 ASMTP46597 345 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 OCRLQ01968 901 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 MEP1AQ16819 746 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 C6orf136Q5SQH8 315 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 FAM71E1Q6IPT2 247 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 IGFL2Q6UWQ7 119 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 CRLF3Q8IUI8 442 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 LRRC34Q8IZ02 419 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 LGI4Q8N135 537 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 ARFGAP2Q8N6H7 521 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 FNDC5Q8NAU1 212 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 APCDD1LQ8NCL9 501 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 OR1N1Q8NGS0 311 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.49■□□□□ 0.555e-15■■□□□ 14.1
CHEK1-215ENST00000533778 NCLNQ969V3 563 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 PPWD1Q96BP3 646 aaKnown RBP18.49■□□□□ 0.55
CHEK1-215ENST00000533778 DEFB126Q9BYW3 111 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 SEMA4CQ9C0C4 833 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 OR8D2Q9GZM6 311 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.49■□□□□ 0.55
CHEK1-215ENST00000533778 STMN3Q9NZ72 180 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 HEY2Q9UBP5 337 aa18.49■□□□□ 0.55
CHEK1-215ENST00000533778 EIF3LQ9Y262 564 aaKnown RBP18.49■□□□□ 0.55
CHEK1-215ENST00000533778 TRBV11-1A0A0K0K1C0 115 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 DYTNA2CJ06 578 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 K7EM74 188 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 CDK2AP1O14519 115 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 HDAC3O15379 428 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 ZFAND5O76080 213 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 PDGFAP04085 211 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 PRPS2P11908 318 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 GPR143P51810 404 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 KLRB1Q12918 225 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 SPRED3Q2MJR0 410 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 HSDL2Q6YN16 418 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 LINC00696Q6ZRV3 163 aa18.48■□□□□ 0.55
CHEK1-215ENST00000533778 MMP21Q8N119 569 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms