RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 TMEM19Q96HH6 336 aa15.79■□□□□ 0.12
CTSB-228ENST00000533455 DMRTB1Q96MA1 342 aa15.79■□□□□ 0.12
CTSB-228ENST00000533455 MED18Q9BUE0 208 aa15.79■□□□□ 0.12
CTSB-228ENST00000533455 POLDIP3Q9BY77 421 aaKnown RBP15.79■□□□□ 0.12
CTSB-228ENST00000533455 EPHX3Q9H6B9 360 aa15.79■□□□□ 0.12
CTSB-228ENST00000533455 SLA2Q9H6Q3 261 aa15.79■□□□□ 0.12
CTSB-228ENST00000533455 ABCB9Q9NP78 766 aa15.79■□□□□ 0.12
CTSB-228ENST00000533455 MIEF1Q9NQG6 463 aa15.79■□□□□ 0.12
CTSB-228ENST00000533455 SPG21Q9NZD8 308 aa15.79■□□□□ 0.12
CTSB-228ENST00000533455 PLEKHB1Q9UF11 243 aaPredicted RBP15.79■□□□□ 0.12
CTSB-228ENST00000533455 A8MV72 311 aaPredicted RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 H3BN98 237 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 GUCY1B2O75343 617 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 RAB36O95755 333 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 MSL3P1P0C860 447 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 PBLDP30039 288 aaPredicted RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 RECQLP46063 649 aaPredicted RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 TGM4P49221 684 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 SMIM11AP58511 58 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 FOXD4Q12950 439 aaPredicted RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 TAB1Q15750 504 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 SLC35F1Q5T1Q4 408 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 LIPKQ5VXJ0 399 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 LHX8Q68G74 356 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 PAQR6Q6TCH4 344 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 DDX53Q86TM3 631 aaKnown RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 MMP21Q8N119 569 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 SLC39A11Q8N1S5 342 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 ZNF354BQ96LW1 612 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 NELL2Q99435 816 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 TMEM246Q9BRR3 403 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 MMP28Q9H239 520 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 TBC1D14Q9P2M4 693 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 KLHL20Q9Y2M5 609 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 CCDC182A6NF36 153 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 STK25O00506 426 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 YES1P07947 543 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 MLLT3P42568 568 aaPredicted RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 KCNJ5P48544 419 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 RACK1P63244 317 aaKnown RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 HNRNPA0Q13151 305 aaKnown RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 TRIM60Q495X7 471 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 CD300LDQ6UXZ3 194 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 CACTIN-AS1Q8N1I8 211 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 NATD1Q8N6N6 113 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 OR52I1Q8NGK6 324 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 OR9A1PQ8NGU1 263 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 RASSF5Q8WWW0 418 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 FGF11Q92914 225 aa15.78■□□□□ 0.12
CTSB-228ENST00000533455 C11orf54Q9H0W9 315 aaPredicted RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 TESQ9UGI8 421 aaKnown RBP15.78■□□□□ 0.12
CTSB-228ENST00000533455 B4DXG7 233 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 PLD2O14939 933 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 LEFTY1O75610 366 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 SLC9A3P48764 834 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 MEF2AQ02078 507 aaPredicted RBP15.77■□□□□ 0.12
CTSB-228ENST00000533455 TAP2Q03519 686 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 GPAT3Q53EU6 434 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 TNFAIP8L2Q6P589 184 aaPredicted RBP15.77■□□□□ 0.12
CTSB-228ENST00000533455 UTS2BQ765I0 119 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 BCDIN3DQ7Z5W3 292 aaKnown RBP15.77■□□□□ 0.12
CTSB-228ENST00000533455 SLC9B2Q86UD5 537 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 NOXA1Q86UR1 476 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 OR4D11Q8NGI4 311 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 RIPOR3Q96MK2 946 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 SLAMF7Q9NQ25 335 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 MAU2Q9Y6X3 613 aa15.77■□□□□ 0.12
CTSB-228ENST00000533455 FABP12A6NFH5 140 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 NRG2O14511 850 aaPredicted RBP15.77■□□□□ 0.11
CTSB-228ENST00000533455 TFECO14948 347 aaPredicted RBP15.77■□□□□ 0.11
CTSB-228ENST00000533455 POLR1CO15160 346 aaPredicted RBP15.77■□□□□ 0.11
CTSB-228ENST00000533455 CXCL10P02778 98 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 DDCP20711 480 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 RPS26P62854 115 aaKnown RBP15.77■□□□□ 0.11
CTSB-228ENST00000533455 TSTA3Q13630 321 aaPredicted RBP15.77■□□□□ 0.11
CTSB-228ENST00000533455 NDUFA9Q16795 377 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 C3orf38Q5JPI3 329 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 DDI2Q5TDH0 399 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 KIAA1211LQ6NV74 962 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 DEF8Q6ZN54 512 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 USP30Q70CQ3 517 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 GPR65Q8IYL9 337 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 AUTS2Q8WXX7 1259 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 TTYH2Q9BSA4 534 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 ISYNA1Q9NPH2 558 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 SEMA3GQ9NS98 782 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 PAQR5Q9NXK6 330 aaPredicted RBP15.77■□□□□ 0.11
CTSB-228ENST00000533455 HTTP42858 3142 aa15.77■□□□□ 0.11
CTSB-228ENST00000533455 A0A1W2PQL4 384 aaPredicted RBP15.76■□□□□ 0.11
CTSB-228ENST00000533455 PRKYO43930 277 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 MMP20O60882 483 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 CLEC2LP0C7M8 214 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 MYL9P24844 172 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 MXD1Q05195 221 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 COX10Q12887 443 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 PLK5Q496M5 336 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 FLYWCH1Q4VC44 716 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 SYT14P1Q58G82 188 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 YIF1BQ5BJH7 314 aa15.76■□□□□ 0.11
CTSB-228ENST00000533455 ARSIQ5FYB1 569 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms