RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ABCA12Q86UK0 2595 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 RNF103-CHMP3A0A140T963 221 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 KLHL33A6NCF5 533 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 PRAMEF4O60810 478 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 ZNF23P17027 643 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 POLR2CP19387 275 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 IL10P22301 178 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 RPS3P23396 243 aaKnown RBP eCLIP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 HTR1EP28566 365 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 CCR7P32248 378 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SPAM1P38567 509 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 YAP1P46937 504 aaKnown RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 PREPP48147 710 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 NR1H2P55055 460 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 EEFSECP57772 596 aaKnown RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 C11orf91Q3C1V1 193 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 FAM174BQ3ZCQ3 159 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SLC36A3Q495N2 470 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 CYBRD1Q53TN4 286 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SPANXN4Q5MJ08 99 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 PRAMEF9Q5VWM5 478 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 GLYATQ6IB77 296 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 TMEM214Q6NUQ4 689 aaKnown RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 DUS1LQ6P1R4 473 aaKnown RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 NXPE1Q8N323 547 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 RNF175Q8N4F7 328 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 CLEC1AQ8NC01 280 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 RMND5BQ96G75 393 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 C12orf66Q96MD2 445 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 RNF145Q96MT1 663 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 ZNF583Q96ND8 569 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SH3GL3Q99963 347 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 WDR77Q9BQA1 342 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 CHID1Q9BWS9 393 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 SLC7A5P2Q9GIP4 190 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 PNPLA3Q9NST1 481 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 MYRFQ9Y2G1 1151 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 CFAP20Q9Y6A4 193 aaKnown RBP7.79□□□□□ -1.16
NEDD8-207ENST00000533242 COLEC10Q9Y6Z7 277 aa7.79□□□□□ -1.16
NEDD8-207ENST00000533242 MGAT4DA6NG13 374 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 E7EQ34 232 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 PFDN6O15212 129 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 LRRTM2O43300 516 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 KLF7O75840 302 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 RASAL1O95294 804 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 STAMBPO95630 424 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 OTCP00480 354 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 GPIP06744 558 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 SPTBP11277 2137 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 EDN3P14138 238 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 PBLDP30039 288 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 HMOX2P30519 316 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 FOLR3P41439 243 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 TSFMP43897 325 aaKnown RBP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 PPP1R8Q12972 351 aaKnown RBP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 ENPP6Q6UWR7 440 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 DET1Q7L5Y6 550 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 MCEMP1Q8IX19 187 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 RIMKLAQ8IXN7 391 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 HS3ST5Q8IZT8 346 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 ZNF786Q8N393 782 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 MAGEE2Q8TD90 523 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 CYGBQ8WWM9 190 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 GTF2H4Q92759 462 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 PYCR2Q96C36 320 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 AURKBQ96GD4 344 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 CD244Q9BZW8 370 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 TRIM15Q9C019 465 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 WWOXQ9NZC7 414 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 PTTG2Q9NZH5 202 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 GPN3Q9UHW5 284 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 CRLS1Q9UJA2 301 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 GNPTGQ9UJJ9 305 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 OSGIN2Q9Y236 505 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 DLGAP4Q9Y2H0 992 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 HEBP2Q9Y5Z4 205 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 A0A1B0GUH1 482 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 AGAP14A8MT82 685 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 PRSS44E7EML9 344 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 ZNF749O43361 778 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 SLC35G4P0C7Q5 338 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 ITGALP20701 1170 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 MYF6P23409 242 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 JAK1P23458 1154 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 TACR1P25103 407 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 NEK2P51955 445 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 LAPTM5Q13571 262 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 CPSF6Q16630 551 aaKnown RBP eCLIP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 OTUD3Q5T2D3 398 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 LIX1Q8N485 282 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 OR2L2Q8NH16 312 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 OR10A6Q8NH74 314 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 VPS50Q96JG6 964 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 CCM2Q9BSQ5 444 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 ACPTQ9BZG2 426 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 P4HTMQ9NXG6 502 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 OPTCQ9UBM4 332 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 ZNF639Q9UID6 485 aa7.78□□□□□ -1.16
NEDD8-207ENST00000533242 ZNF490Q9ULM2 529 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-207ENST00000533242 TNPO3Q9Y5L0 923 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms