RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 FAM214AQ32MH5 1076 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 TMEM236Q5W0B7 351 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ZNF283Q8N7M2 679 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 SMARCD2Q92925 531 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 L3HYPDHQ96EM0 354 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 TMEM246Q9BRR3 403 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 NDUFV2P19404 249 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 SNTB2Q13425 540 aaKnown RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 BATFQ16520 125 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 NTRK2Q16620 822 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ATAD3CQ5T2N8 411 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 MANEALQ5VSG8 457 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 GTF2IRD2BQ6EKJ0 949 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 GTF2IRD2Q86UP8 949 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 OR9I1Q8NGQ6 314 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 NAA11Q9BSU3 229 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 HOXD1Q9GZZ0 328 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 RAB9BQ9NP90 201 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 RXFP3Q9NSD7 469 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ERVK-18Q9QC07 812 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 EPHA6Q9UF33 1036 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ZFR2Q9UPR6 939 aaKnown RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 GXYLT2A0PJZ3 443 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 SYNGR4O95473 234 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 SNAP29O95721 258 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 PLATP00750 562 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 IFNA10P01566 189 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ZNF8P17098 575 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 CELP19835 753 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 PRKACGP22612 351 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 EDNRBP24530 442 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ACRV1P26436 265 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ACVRL1P37023 503 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 PITPNBP48739 271 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 RIDAP52758 137 aaKnown RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 CLDN8P56748 225 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 KEAP1Q14145 624 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ZNF169Q14929 603 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 RASGRP3Q8IV61 690 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ACBD7Q8N6N7 88 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ARMC5Q96C12 935 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 IMP4Q96G21 291 aaKnown RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 SLC2A13Q96QE2 648 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 SYT3Q9BQG1 590 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 NSUN3Q9H649 340 aaKnown RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ARMC1Q9NVT9 282 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 KLHL9Q9P2J3 617 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 PCDHAC2Q9Y5I4 1007 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 LMO7Q8WWI1 1683 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 LOC100509620A0A075B734 347 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 A0A1B0GVT2 93 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 TMEM88BA6NKF7 163 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 B3GALNT1O75752 331 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 PFKMP08237 780 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 AMY2BP19961 511 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 PRKXP51817 358 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ARHGAP1Q07960 439 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 LIPKQ5VXJ0 399 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 CCBE1Q6UXH8 406 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 TMEM156Q8N614 296 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 CCDC71LQ8N9Z2 235 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 HOXB13Q92826 284 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 SGTBQ96EQ0 304 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 LATO43561 262 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 PAK4O96013 591 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 IFNA17P01571 189 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 PGCP20142 388 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 FXYD6P3P58550 94 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 RPS15AP62244 130 aaKnown RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 MLLT1Q03111 559 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 NFATC2Q13469 925 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 RAB11BQ15907 218 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ASPGQ86U10 573 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 IFNL1Q8IU54 200 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 UMODL1-AS1Q8N2C9 162 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 VWA5B2Q8N398 1253 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 DNAJC22Q8N4W6 341 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 CHDHQ8NE62 594 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 POC1BQ8TC44 478 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 MYRFLQ96LU7 910 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 TREX2Q9BQ50 279 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-233ENST00000532787 SULT4A1Q9BR01 284 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 OR51B5Q9H339 312 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 PRTFDC1Q9NRG1 225 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 ERVK-19Q9WJR5 959 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 NUBP2Q9Y5Y2 271 aa7.29□□□□□ -1.24
CTNND1-233ENST00000532787 SLC1A7O00341 560 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 APOC3P02656 99 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 MAT2AP31153 395 aaKnown RBP7.28□□□□□ -1.24
CTNND1-233ENST00000532787 FAM69AQ5T7M9 428 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 OR52E8Q6IFG1 317 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 SLC16A9Q7RTY1 509 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 LAS2Q8IYD9 372 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 NUP43Q8NFH3 380 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 MAPK15Q8TD08 544 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 DDX1Q92499 740 aaKnown RBP7.28□□□□□ -1.24
CTNND1-233ENST00000532787 SECISBP2Q96T21 854 aaKnown RBP7.28□□□□□ -1.24
CTNND1-233ENST00000532787 ARL6Q9H0F7 186 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 A0A0G2JN53 185 aa7.28□□□□□ -1.24
CTNND1-233ENST00000532787 C12orf71A8MTZ7 269 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms