RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 NXPE4Q6UWF7 544 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF100Q8IYN0 542 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 MRPL43Q8N983 215 aaKnown RBP14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 TMEM14AQ9Y6G1 99 aa14.15□□□□□ -0.14
PCDHA9-202ENST00000532602 TIAM2Q8IVF5 1701 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 PROM1O43490 865 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 PORP16435 677 aaPredicted RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 PTGR1Q14914 329 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 SWT1Q5T5J6 900 aaKnown RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 ZNF782Q6ZMW2 699 aaPredicted RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 FTMTQ8N4E7 242 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 TOMM5Q8N4H5 51 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 HORMAD2Q8N7B1 307 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 RPF2Q9H7B2 306 aaKnown RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 ENY2Q9NPA8 101 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 GRIN2CQ14957 1233 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 SF3B4Q15427 424 aaKnown RBP eCLIP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 RLN3Q8WXF3 142 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 OR1F2PQ96R84 312 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 MED11Q9P086 117 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 PLEKHA6Q9Y2H5 1048 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 CDH10Q9Y6N8 788 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC35F4A4IF30 521 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 TUBA3CQ13748 450 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 PM20D1Q6GTS8 502 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 ZER1Q7Z7L7 766 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 NLGN4XQ8N0W4 816 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 SCRN2Q96FV2 425 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 STARD5Q9NSY2 213 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 TUBA8Q9NY65 449 aaPredicted RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 CITO14578 2027 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 LOC100130705A0A1B0GUX0 176 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 PLD2O14939 933 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 S100A6P06703 90 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC2A2P11168 524 aaPredicted RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 RORAP35398 523 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 SEC23BQ15437 767 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 EIF5AL1Q6IS14 154 aaKnown RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 OR6N2Q8NGY6 317 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 PEX11GQ96HA9 241 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 SMIM14Q96QK8 99 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 OR51I1Q9H343 314 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 BRF2Q9HAW0 419 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 MKS1Q9NXB0 559 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 POU2F3Q9UKI9 436 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 ENTPD2Q9Y5L3 495 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 TMX2-CTNND1H3BSU7 103 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC35E2BP0CK96 405 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 HERV-K104P61576 105 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 RPS26P62854 115 aaKnown RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 UNC50Q53HI1 259 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 KIAA1614Q5VZ46 1190 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 ERMP1Q7Z2K6 904 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 PAQR7Q86WK9 346 aa14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 DNMT3BQ9UBC3 853 aaKnown RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 C14orf166Q9Y224 244 aaKnown RBP14.14□□□□□ -0.15
PCDHA9-202ENST00000532602 C11orf98E9PRG8 122 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 NUDT6P53370 316 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 RAET1LQ5VY80 246 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 SHQ1Q6PI26 577 aaKnown RBP14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 RBM12BQ8IXT5 1001 aaKnown RBP14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 SHKBP1Q8TBC3 707 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 ERMAPQ96PL5 475 aaPredicted RBP14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC7A11Q9UPY5 501 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 SOCS7O14512 581 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 AURKAO14965 403 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 ADAMTS4O75173 837 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 GNG2P59768 71 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 MSANTD1Q6ZTZ1 278 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 TMEM203Q969S6 136 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 TMEM80Q96HE8 168 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 TMEM41AQ96HV5 264 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 TRPV4Q9HBA0 871 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 FAM227AF5H4B4 570 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 TOR1BO14657 336 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 PROS1P07225 676 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC35F1Q5T1Q4 408 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 MANEALQ5VSG8 457 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 FIGLAQ6QHK4 219 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 CARM1Q86X55 608 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 SLC22A4Q9H015 551 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 VSTM2BA6NLU5 285 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 HRGP04196 525 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 OTX2P32243 289 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 ACADVLP49748 655 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 OR2B6P58173 313 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 DOC2AQ14183 400 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 GLT8D1Q68CQ7 371 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 Q6ZSR6 202 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 TOR1AIP2Q8NFQ8 470 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 OR8K5Q8NH50 307 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 PTTG2Q9NZH5 202 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 FAAHO00519 579 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 TMEM31Q5JXX7 168 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 FAM69BQ5VUD6 431 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 CARD17Q5XLA6 110 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 ZNF613Q6PF04 617 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 INO80EQ8NBZ0 244 aaPredicted RBP14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 TTYH2Q9BSA4 534 aa14.13□□□□□ -0.15
PCDHA9-202ENST00000532602 METTL8Q9H825 291 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms