RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 OR6Y1Q8NGX8 325 aa14.02□□□□□ -0.17
CPSF1-208ENST00000532560 BCAS4Q8TDM0 211 aa14.02□□□□□ -0.17
CPSF1-208ENST00000532560 APIPQ96GX9 242 aa14.02□□□□□ -0.17
CPSF1-208ENST00000532560 DGAT2Q96PD7 388 aa14.02□□□□□ -0.17
CPSF1-208ENST00000532560 SHCBP1LQ9BZQ2 653 aa14.02□□□□□ -0.17
CPSF1-208ENST00000532560 TRIM4Q9C037 500 aa14.02□□□□□ -0.17
CPSF1-208ENST00000532560 SIRT5Q9NXA8 310 aa14.02□□□□□ -0.17
CPSF1-208ENST00000532560 CNTRLQ7Z7A1 2325 aa14.02□□□□□ -0.17
CPSF1-208ENST00000532560 TRAV17A0A0B4J275 112 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 C1orf226A1L170 272 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 NPIPB8E9PQR5 432 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 AZIN1O14977 448 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 PGRMC2O15173 223 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 BIRC5O15392 142 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 PCDH7O60245 1069 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 MAN1A2O60476 641 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 ZWINTO95229 277 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 CHRNGP07510 517 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 DHRS4L1P0CG22 281 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 TIA1P31483 386 aaKnown RBP eCLIP14.01□□□□□ -0.17
CPSF1-208ENST00000532560 GALNSP34059 522 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 GSTM5P46439 218 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 MLLT10P55197 1068 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 CORO7P57737 925 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 MLF1P58340 268 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 RAE1P78406 368 aaKnown RBP14.01□□□□□ -0.17
CPSF1-208ENST00000532560 FOXK1P85037 733 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 IMPG1Q17R60 797 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 SPRED3Q2MJR0 410 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 ARL13AQ5H913 290 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-208ENST00000532560 SLC48A1Q6P1K1 146 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 SCIMPQ6UWF3 145 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 ZCCHC23Q6ZST2 131 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 RPS19BP1Q86WX3 136 aaKnown RBP14.01□□□□□ -0.17
CPSF1-208ENST00000532560 OR1N1Q8NGS0 311 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 CPT1CQ8TCG5 803 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 SLC2A12Q8TD20 617 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 MIB2Q96AX9 1013 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 TM4SF18Q96CE8 201 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 RBM18Q96H35 190 aaKnown RBP14.01□□□□□ -0.17
CPSF1-208ENST00000532560 FAIM2Q9BWQ8 316 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 DEFB126Q9BYW3 111 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 EML4Q9HC35 981 aaKnown RBP14.01□□□□□ -0.17
CPSF1-208ENST00000532560 PLA2G3Q9NZ20 509 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 PCDHA9Q9Y5H5 950 aa14.01□□□□□ -0.17
CPSF1-208ENST00000532560 GNG14A0A1W2PPG7 69 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 WASHC1A8K0Z3 465 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 GABRR3A8MPY1 467 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 DYRK3O43781 588 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 CHEK2O96017 543 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 FGF4P08620 206 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 SLC35E2P0CK97 266 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 NEFHP12036 1026 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 TNNI3P19429 210 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 PRPH2P23942 346 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 PIK3R1P27986 724 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 SERPINB3P29508 390 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 LSP1P33241 339 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 PPP2R2AP63151 447 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 TUBA3CQ13748 450 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 INAQ16352 499 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 PRR30Q53SZ7 412 aaPredicted RBP14□□□□□ -0.17
CPSF1-208ENST00000532560 TUBA3EQ6PEY2 450 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 CATSPER1Q8NEC5 780 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 OR8K3Q8NH51 312 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 ZNF721Q8TF20 911 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 UCN3Q969E3 161 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 FBXL20Q96IG2 436 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 METTL2AQ96IZ6 378 aaKnown RBP14□□□□□ -0.17
CPSF1-208ENST00000532560 ART5Q96L15 291 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 OR8D2Q9GZM6 311 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14□□□□□ -0.17
CPSF1-208ENST00000532560 CDCP1Q9H5V8 836 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 COPS7AQ9UBW8 275 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 CES1P1Q9UKY3 287 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 CCL27Q9Y4X3 112 aa14□□□□□ -0.17
CPSF1-208ENST00000532560 SLC28A1O00337 649 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 FCHO1O14526 889 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 NDUFAB1O14561 156 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 OR10H2O60403 315 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 ZFAND5O76080 213 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 F10P00742 488 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 IGKV3-11P04433 115 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 ARRB2P32121 409 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 TRHRP34981 398 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-208ENST00000532560 MPP2Q14168 576 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 INPP5JQ15735 1006 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-208ENST00000532560 SPDYAQ5MJ70 313 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 RPUSD3Q6P087 351 aaKnown RBP13.99□□□□□ -0.17
CPSF1-208ENST00000532560 HSDL2Q6YN16 418 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 DGAT2L6Q6ZPD8 337 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 YTHDF3Q7Z739 585 aaKnown RBP13.99□□□□□ -0.17
CPSF1-208ENST00000532560 NUDCD3Q8IVD9 361 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 MMP21Q8N119 569 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 MDS2Q8NDY4 140 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 OR4K14Q8NGD5 310 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 PPWD1Q96BP3 646 aaKnown RBP13.99□□□□□ -0.17
CPSF1-208ENST00000532560 ZBTB9Q96C00 473 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 TLCD1Q96CP7 247 aa13.99□□□□□ -0.17
CPSF1-208ENST00000532560 SENP5Q96HI0 755 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms