RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 PHF19Q5T6S3 580 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 TTLL10Q6ZVT0 673 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 CALHM3Q86XJ0 350 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 TTC29Q8NA56 475 aaPredicted RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 HIPK4Q8NE63 616 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 OR5AK3PQ8NH89 298 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 MMABQ96EY8 250 aaPredicted RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 ECSITQ9BQ95 431 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 TPT1P8Q9HAU6 139 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 ACSS1Q9NUB1 689 aaPredicted RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 OCIAD1Q9NX40 245 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 MS4A12Q9NXJ0 267 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 SUCOQ9UBS9 1254 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 ACSL6Q9UKU0 697 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 VPS4AQ9UN37 437 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 PCDHGB4Q9UN71 923 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 MAU2Q9Y6X3 613 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 CCKBRP32239 447 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 MVDP53602 400 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 CASP9P55211 416 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 RAB38P57729 211 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 ID2Q02363 134 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 ERV3-1Q14264 604 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 CEBPEQ15744 281 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 NATD1Q8N6N6 113 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 ASB9Q96DX5 294 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 STRADBQ9C0K7 418 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 EPS8L2Q9H6S3 715 aa20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 SIDT1Q9NXL6 827 aaKnown RBP20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 AKAP7Q9P0M2 348 aaPredicted RBP20.66■□□□□ 0.9
PACSIN3-209ENST00000532457 LDB3O75112 727 aa20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 BCAS2O75934 225 aaPredicted RBP20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 NTRK1P04629 796 aa20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 ATXN8OSP0DMR3 200 aa20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 ALAS2P22557 587 aa20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 C16orf72Q14CZ0 275 aa20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 C10orf67Q8IYJ2 551 aa20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 ZBED6CLQ96FA7 236 aaPredicted RBP20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 OR6C1Q96RD1 312 aa20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 BBS4Q96RK4 519 aa20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 KCTD14Q9BQ13 255 aaPredicted RBP20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 GMEB1Q9Y692 573 aa20.65■□□□□ 0.9
PACSIN3-209ENST00000532457 OR2W5A6NFC9 320 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 TIAF1O95411 115 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 GPX2P18283 190 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 TLX1P31314 330 aaPredicted RBP20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 OR1D4P47884 311 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 XKP51811 444 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 NCBP2P52298 156 aaKnown RBP eCLIP20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 MLC1Q15049 377 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 ISXQ2M1V0 245 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 FAM214AQ32MH5 1076 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 COX20Q5RI15 118 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 PSMA8Q8TAA3 256 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 ANKRD9Q96BM1 317 aaPredicted RBP20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 PEX11GQ96HA9 241 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 SH3GL1Q99961 368 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 SLC35A5Q9BS91 424 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 RBCK1Q9BYM8 510 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 ZNF282Q9UDV7 671 aaPredicted RBP20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 SNX8Q9Y5X2 465 aa20.64■□□□□ 0.9
PACSIN3-209ENST00000532457 COL27A1Q8IZC6 1860 aaPredicted RBP20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 FGF17O60258 216 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 CSO75390 466 aaKnown RBP20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 NCK1P16333 377 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 CSNK2A2P19784 350 aaPredicted RBP20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 SOX18P35713 384 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 TRAP1Q12931 704 aaKnown RBP20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 SPATS1Q496A3 300 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 OR52E8Q6IFG1 317 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 TLDC1Q6P9B6 456 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 GPR135Q8IZ08 494 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 OR4K14Q8NGD5 310 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 APMAPQ9HDC9 416 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 PSME2Q9UL46 239 aa20.64■□□□□ 0.89
PACSIN3-209ENST00000532457 HTR1EP28566 365 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 CSTF2P33240 577 aaKnown RBP eCLIP20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 FOLH1Q04609 750 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 RIPK1Q13546 671 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 FLOT2Q14254 428 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 ADRM1Q16186 407 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 FXNQ16595 210 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 CYP2R1Q6VVX0 501 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 SLC38A9Q8NBW4 561 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 OR51Q1Q8NH59 317 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 CMKLR1Q99788 373 aa20.63■□□□□ 0.89
PACSIN3-209ENST00000532457 H0YIG0 161 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 JRKO75564 520 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 NUDT7P0C024 238 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 DDX5P17844 614 aaKnown RBP20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 ATP6V1B2P21281 511 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 UQCRC2P22695 453 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 AVPR1BP47901 424 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 ACY1Q03154 408 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 RGNQ15493 299 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 LTB4RQ15722 352 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 TMPRSS7Q7RTY8 843 aa20.62■□□□□ 0.89
PACSIN3-209ENST00000532457 PTRH1Q86Y79 214 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms