RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 IGFBP5P24593 272 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 HOXA6P31267 233 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 PXNP49023 591 aaPredicted RBP11.62□□□□□ -0.55
CHD7-211ENST00000532149 HLCSP50747 726 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 NCBP2P52298 156 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHD7-211ENST00000532149 EPHA4P54764 986 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 HHEXQ03014 270 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 TUBA3CQ13748 450 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 NKG7Q16617 165 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 NDUFA9Q16795 377 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 ATAD3BQ5T9A4 648 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 KDM4DQ6B0I6 523 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 FBXO42Q6P3S6 717 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 USP53Q70EK8 1073 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 TOR1AIP2Q8NFQ8 470 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 FLVCR1-AS1Q8TAF5 88 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 SPPL2AQ8TCT8 520 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 UTP15Q8TED0 518 aaKnown RBP11.62□□□□□ -0.55
CHD7-211ENST00000532149 ZDHHC1Q8WTX9 485 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 ZNF566Q969W8 418 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 TPD52L3Q96J77 140 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 SLC35G5Q96KT7 338 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 ZNF300Q96RE9 604 aaPredicted RBP11.62□□□□□ -0.55
CHD7-211ENST00000532149 ZNF556Q9HAH1 456 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 CCNB1IP1Q9NPC3 277 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 EXD2Q9NVH0 621 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 GIN1Q9NXP7 522 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 KIF17Q9P2E2 1029 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 APOBEC3BQ9UH17 382 aaKnown RBP11.62□□□□□ -0.55
CHD7-211ENST00000532149 FBXL21Q9UKT6 434 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 CES1P1Q9UKY3 287 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 MAP4K5Q9Y4K4 846 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 ENPP4Q9Y6X5 453 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 V9GYQ6 96 aa11.62□□□□□ -0.55
CHD7-211ENST00000532149 NUP214P35658 2090 aaPredicted RBP11.61□□□□□ -0.55
CHD7-211ENST00000532149 A0A087WV62 115 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 TTC36A6NLP5 189 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 FAM170BA6NMN3 283 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 TLR4O00206 839 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 RTCAO00442 366 aaKnown RBP11.61□□□□□ -0.55
CHD7-211ENST00000532149 KIF1CO43896 1103 aaKnown RBP11.61□□□□□ -0.55
CHD7-211ENST00000532149 HS6ST1O60243 411 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 PGM3O95394 542 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 AK1P00568 194 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 TFAP2AP05549 437 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 GUSBP08236 651 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 JUNDP17535 347 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 ALOX12P18054 663 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 MATN1P21941 496 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 RRM2P31350 389 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 SOX11P35716 441 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 NUP107P57740 925 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 TNFRSF17Q02223 184 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 ZSWIM7Q19AV6 140 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 WDR45BQ5MNZ6 344 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 GARNL3Q5VVW2 1013 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 FAHD1Q6P587 224 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 ZNF793Q6ZN11 406 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 LGI4Q8N135 537 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 SLC22A18ASQ8N1D0 253 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 C10orf111Q8N326 155 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 ZNF786Q8N393 782 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 FAM86B1Q8N7N1 296 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 OR4K14Q8NGD5 310 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 NFKBIDQ8NI38 313 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 SUN3Q8TAQ9 357 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 GIPC3Q8TF64 312 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 EXOSC8Q96B26 276 aaKnown RBP11.61□□□□□ -0.55
CHD7-211ENST00000532149 TCTN2Q96GX1 697 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 ZNF354BQ96LW1 612 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 PIP5K1AQ99755 562 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 TRIM4Q9C037 500 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 POLR2J2Q9GZM3 115 aaKnown RBP11.61□□□□□ -0.55
CHD7-211ENST00000532149 POLR2J3Q9H1A7 115 aaKnown RBP11.61□□□□□ -0.55
CHD7-211ENST00000532149 TOR3AQ9H497 397 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 GLIPR2Q9H4G4 154 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 ERVMER34-1Q9H9K5 563 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 ENAMQ9NRM1 1142 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 SIRT3Q9NTG7 399 aaPredicted RBP11.61□□□□□ -0.55
CHD7-211ENST00000532149 ZCCHC3Q9NUD5 404 aaKnown RBP11.61□□□□□ -0.55
CHD7-211ENST00000532149 POMT2Q9UKY4 750 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 DOLKQ9UPQ8 538 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 SLC9A8Q9Y2E8 581 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 POFUT2Q9Y2G5 429 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 CSNK1G3Q9Y6M4 447 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 BRWD1Q9NSI6 2320 aa11.61□□□□□ -0.55
CHD7-211ENST00000532149 PLXND1Q9Y4D7 1925 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 A0A1W2PR48 441 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 A0A1W2PR77 199 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 TNFRSF11BO00300 401 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 SYT5O00445 386 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 MPZL2O60487 215 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 LINGO3P0C6S8 592 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 SMIM18P0DKX4 95 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 POLR2CP19387 275 aaPredicted RBP11.6□□□□□ -0.55
CHD7-211ENST00000532149 CPN2P22792 545 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 ALDH3B2P48448 385 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 BTN3A2P78410 334 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 VLDLRP98155 873 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms