RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TXNDC16Q9P2K2 825 aa16.97■□□□□ 0.31
SSSCA1-206ENST00000531405 LRRC3CA6NJW4 275 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 CTAG2O75638 210 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 TRPC1P48995 793 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 HNRNPH2P55795 449 aaKnown RBP16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 RAB10P61026 200 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 DLG1Q12959 904 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 ZKSCAN8Q15776 578 aaPredicted RBP16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 SLC25A35Q3KQZ1 300 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 OR4C11Q6IEV9 310 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 CHSY3Q70JA7 882 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 OR10G3Q8NGC4 313 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 CMTM7Q96FZ5 175 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 POM121Q96HA1 1249 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 JSRP1Q96MG2 331 aaPredicted RBP16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 GAL3ST4Q96RP7 486 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 CPNE1Q99829 537 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 GPATCH1Q9BRR8 931 aaKnown RBP16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 TMUB1Q9BVT8 246 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 POLDIP3Q9BY77 421 aaKnown RBP16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 KCNF1Q9H3M0 494 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 RPF2Q9H7B2 306 aaKnown RBP16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 ZFP64Q9NPA5 681 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 ZNF358Q9NW07 568 aa16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 BOKQ9UMX3 212 aaPredicted RBP16.96■□□□□ 0.31
SSSCA1-206ENST00000531405 TCRBV9S1A1TA0A576 114 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 WASHC1A8K0Z3 465 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 KDM4EB2RXH2 506 aaPredicted RBP16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 SUPT3HB4E1H0 165 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 UBXN8O00124 270 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 SUPT3HO75486 399 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 FAM155BO75949 473 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 CD99P14209 185 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 WNT3P56703 355 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 HERVK_113P63132 956 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 ERVK-8P63133 956 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 PLIN5Q00G26 463 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 TNFRSF17Q02223 184 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 RIPPLY2Q5TAB7 128 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 DEPDC1Q5TB30 811 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 SEM1Q6ZVN7 128 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 CMC1Q7Z7K0 106 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 ULK2Q8IYT8 1036 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 FBXW8Q8N3Y1 598 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 CDKL2Q92772 493 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 UBE2E3Q969T4 207 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 RBM18Q96H35 190 aaKnown RBP16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 FBXL20Q96IG2 436 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 ERVK-6Q9BXR3 956 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 DPH5Q9H2P9 285 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 NUDT4Q9NZJ9 180 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 ERVK-19Q9WJR5 959 aa16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 CHCHD2Q9Y6H1 151 aaPredicted RBP16.95■□□□□ 0.3
SSSCA1-206ENST00000531405 CCDC188H7C350 402 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 PLPP1O14494 284 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 DYRK3O43781 588 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 C1QAP02745 245 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 FBXO45P0C2W1 286 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 GABRA1P14867 456 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 ALOX15P16050 662 aaPredicted RBP16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 UQCRC1P31930 480 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 GP5P40197 560 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 KIR2DL3P43628 341 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 RAP1GDS1P52306 607 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 ILF2Q12905 390 aaKnown RBP16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 CBLBQ13191 982 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 ZNF267Q14586 743 aaPredicted RBP16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 ISCA2Q86U28 154 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 GPR180Q86V85 440 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 LRRC25Q8N386 305 aaPredicted RBP16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 RELL2Q8NC24 303 aaPredicted RBP16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 NAXEQ8NCW5 288 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 HUS1BQ8NHY5 278 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 NEIL3Q8TAT5 605 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 RGMAQ96B86 450 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 ART5Q96L15 291 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 MTERF1Q99551 399 aaKnown RBP16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 FOXC2Q99958 501 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 WWTR1Q9GZV5 400 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 CXXC4Q9H2H0 198 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 CRIM1Q9NZV1 1036 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 OPTCQ9UBM4 332 aa16.94■□□□□ 0.3
SSSCA1-206ENST00000531405 GLOD5A6NK44 160 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 FAM159BA6NKW6 160 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 K7EPI3 171 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 SLC35E2BP0CK96 405 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 SLMAPQ14BN4 828 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 CEBPEQ15744 281 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 GRHL2Q6ISB3 625 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 TMEM64Q6YI46 380 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 RNF111Q6ZNA4 994 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 RAPH1Q70E73 1250 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 SLC29A4Q7RTT9 530 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 MYLK4Q86YV6 388 aaPredicted RBP16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 CTAGE3PQ8IX95 158 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 ST13P4Q8IZP2 240 aaPredicted RBP16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 LIX1Q8N485 282 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 SLC15A4Q8N697 577 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 STAG3L4Q8TBR4 150 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 UBTD2Q8WUN7 234 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms