RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CR1P17927 2039 aa17.35■□□□□ 0.37
SSRP1-204ENST00000529002 CUBNO60494 3623 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 CDC7O00311 574 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 RTCAO00442 366 aaKnown RBP17.34■□□□□ 0.37
SSRP1-204ENST00000529002 CASKO14936 926 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 PRAMEF4O60810 478 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 CNOT4O95628 575 aaKnown RBP17.34■□□□□ 0.37
SSRP1-204ENST00000529002 IGKV3-11P04433 115 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 FBXO45P0C2W1 286 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 KRTAP1-1Q07627 177 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 EFTUD2Q15029 972 aaKnown RBP eCLIP17.34■□□□□ 0.371e-8■■■■□ 26.3
SSRP1-204ENST00000529002 PPP1R3AQ16821 1122 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 ADPRMQ3LIE5 342 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 WIPI1Q5MNZ9 446 aaPredicted RBP17.34■□□□□ 0.37
SSRP1-204ENST00000529002 FNDC7Q5VTL7 733 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 PRAMEF9Q5VWM5 478 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 TRIM40Q6P9F5 258 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 SYDE1Q6ZW31 735 aaPredicted RBP17.34■□□□□ 0.37
SSRP1-204ENST00000529002 ISL2Q96A47 359 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 ZNF597Q96LX8 424 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 GNRHR2Q96P88 292 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 CCL19Q99731 98 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 COPS7BQ9H9Q2 264 aaPredicted RBP17.34■□□□□ 0.37
SSRP1-204ENST00000529002 CNIH4Q9P003 139 aa17.34■□□□□ 0.37
SSRP1-204ENST00000529002 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.33■□□□□ 0.36
SSRP1-204ENST00000529002 NPEPPSL1A6NEC2 478 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 DEFB108AA8MXU0 73 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 CES2O00748 559 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 FGF17O60258 216 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 H2AFYO75367 372 aaKnown RBP17.33■□□□□ 0.36
SSRP1-204ENST00000529002 SH3BGRLO75368 114 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 ERN1O75460 977 aaKnown RBP17.33■□□□□ 0.36
SSRP1-204ENST00000529002 BANF1O75531 89 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 WDR47O94967 919 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 IL18BPO95998 194 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 FGGP02679 453 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 CDK9P50750 372 aaKnown RBP17.33■□□□□ 0.36
SSRP1-204ENST00000529002 SERTAD2Q14140 314 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 ARMC3Q5W041 872 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 UBE3DQ7Z6J8 389 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 TMEM139Q8IV31 216 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 PM20D2Q8IYS1 436 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 GPATCH11Q8N954 259 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 GABPB2Q8TAK5 448 aaPredicted RBP17.33■□□□□ 0.36
SSRP1-204ENST00000529002 DIO2Q92813 273 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 TESMINQ9Y4I5 508 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 PRR14LQ5THK1 2151 aa17.33■□□□□ 0.36
SSRP1-204ENST00000529002 A0A088AWK7 358 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 CLEC3AO75596 197 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 KRT14P02533 472 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 HPNP05981 417 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 C8BP07358 591 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 ENO2P09104 434 aaPredicted RBP17.32■□□□□ 0.36
SSRP1-204ENST00000529002 MLNP12872 115 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 ZNF10P21506 573 aaPredicted RBP17.32■□□□□ 0.36
SSRP1-204ENST00000529002 MSH2P43246 934 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 MAGEA3P43357 314 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 NR1H2P55055 460 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 TOMM20Q15388 145 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 ACKR1Q16570 336 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 FBXO48Q5FWF7 155 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 GCNT2Q8N0V5 402 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 MAPK1IP1LQ8NDC0 245 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 MCUQ8NE86 351 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 INTS12Q96CB8 462 aaKnown RBP17.32■□□□□ 0.36
SSRP1-204ENST00000529002 PIK3IP1Q96FE7 263 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 EGFL8Q99944 293 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 UBQLN3Q9H347 655 aa17.32■□□□□ 0.36
SSRP1-204ENST00000529002 XAB2Q9HCS7 855 aaKnown RBP17.32■□□□□ 0.36
SSRP1-204ENST00000529002 ZNF490Q9ULM2 529 aaPredicted RBP17.32■□□□□ 0.36
SSRP1-204ENST00000529002 ANKDD1BA6NHY2 528 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 SNPHO15079 494 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 CCDC175P0C221 793 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 SERPINB3P29508 390 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 STT3AP46977 705 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 NAGLUP54802 743 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 FBXW4P57775 412 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 CRYMQ14894 314 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 HMBOX1Q6NT76 420 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 TTC27Q6P3X3 843 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 YRDCQ86U90 279 aaKnown RBP17.31■□□□□ 0.36
SSRP1-204ENST00000529002 SLC15A4Q8N697 577 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 TTLQ8NG68 377 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 ABTB1Q969K4 478 aaPredicted RBP17.31■□□□□ 0.36
SSRP1-204ENST00000529002 RILPQ96NA2 401 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 WFIKKN1Q96NZ8 548 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 DGAT2Q96PD7 388 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 HS3ST6Q96QI5 342 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 TUBA1CQ9BQE3 449 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 CALHM2Q9HA72 323 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 KLHL28Q9NXS3 571 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 GUCA1BQ9UMX6 200 aa17.31■□□□□ 0.36
SSRP1-204ENST00000529002 CTIFO43310 598 aaKnown RBP17.3■□□□□ 0.36
SSRP1-204ENST00000529002 PRKRAO75569 313 aaKnown RBP17.3■□□□□ 0.36
SSRP1-204ENST00000529002 GNAZP19086 355 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 CPOXP36551 454 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 HERVK_113P63132 956 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 ERVK-8P63133 956 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 FAM27E3Q08E93 113 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 RCN2Q14257 317 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms