RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	OR52E8	Q6IFG1	317 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	ZYG11A	Q6WRX3	759 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	MDGA2	Q7Z553	956 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	C9orf40	Q8IXQ3	194 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	OR2W6P	Q8NHA6	318 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	TMEM125	Q96AQ2	219 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	FBXL20	Q96IG2	436 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	GPR137	Q96N19	417 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	RASL10B	Q96S79	203 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	C12orf65	Q9H3J6	166 aa	Known RBP	10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	GSTO2	Q9H4Y5	243 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	WDR41	Q9HAD4	459 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	COPS7A	Q9UBW8	275 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	SEC14L3	Q9UDX4	400 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	KLF13	Q9Y2Y9	288 aa	Predicted RBP	10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	CPAMD8	Q8IZJ3	1885 aa		10.91	□□□□□ -0.66
PSMC3-205	ENST00000528362	ARHGAP10	A1A4S6	786 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362		A8MVJ9	347 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	NPIPA5	E9PKD4	350 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	UBFD1	O14562	309 aa	Known RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	ZNF500	O60304	480 aa	Predicted RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	OR10H2	O60403	315 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	PLIN3	O60664	434 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	ZNF354A	O60765	605 aa	Predicted RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	CDH16	O75309	829 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	KRT6A	P02538	564 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	KRT6B	P04259	564 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	MYL2	P10916	166 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	HSD3B1	P14060	373 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	ZNF24	P17028	368 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	KRT4	P19013	534 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	HSD3B2	P26439	372 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	CRHR1	P34998	444 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	SOX3	P41225	446 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	KRT6C	P48668	564 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	MAPK12	P53778	367 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	PKNOX1	P55347	436 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	ALDH6A1	Q02252	535 aa	Known RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	BIK	Q13323	160 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	SPRED3	Q2MJR0	410 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	CCNYL2	Q5T2Q4	361 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	C1QL3	Q5VWW1	255 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	PAGE2	Q7Z2X7	111 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	SULF2	Q8IWU5	870 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	GPALPP1	Q8IXQ4	340 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	MMP21	Q8N119	569 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	CPSF7	Q8N684	471 aa	Known RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	C1orf52	Q8N6N3	182 aa	Known RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	CCNYL1	Q8N7R7	359 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	FAM98A	Q8NCA5	519 aa	Known RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	ASB15	Q8WXK1	588 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	RBM18	Q96H35	190 aa	Known RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	PELO	Q9BRX2	385 aa	Known RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	CNPPD1	Q9BV87	410 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	ACPT	Q9BZG2	426 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	DEPP	Q9NTK1	212 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	HPF1	Q9NWY4	346 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	AHSP	Q9NZD4	102 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	NPIPA1	Q9UND3	350 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	STK38L	Q9Y2H1	464 aa		10.9	□□□□□ -0.66
PSMC3-205	ENST00000528362	SCN2A	Q99250	2005 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	SPTBN1	Q01082	2364 aa	Known RBP	10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362		A0A0G2JMM0	328 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362		A0A1W2PPB8	328 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362		A0A1W2PRS3	328 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362		A1L4Q6	167 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	KIR3DP1	A8MWS1	328 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	DYRK3	O43781	588 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	PEX1	O43933	1283 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	ESRRB	O95718	433 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	CLPS	P04118	112 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	ENO1	P06733	434 aa	Known RBP	10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	NUDT17	P0C025	328 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	SLC35E2	P0CK97	266 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	GALNS	P34059	522 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	RFC3	P40938	356 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	CCT5	P48643	541 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	MEOX1	P50221	254 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	GPR85	P60893	370 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	ERVK-8	P63133	956 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	SLC18A2	Q05940	514 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	CSTF3	Q12996	717 aa	Known RBP	10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	ZNF267	Q14586	743 aa	Predicted RBP	10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	ZNF750	Q32MQ0	723 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	HIST2H2BC	Q6DN03	193 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	IL20RB	Q6UXL0	311 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	FRMD7	Q6ZUT3	714 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	C4orf33	Q8N1A6	199 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	PSD4	Q8NDX1	1056 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	OR5L2	Q8NGL0	311 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	NUBPL	Q8TB37	319 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	METTL6	Q8TCB7	284 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	AGAP11	Q8TF27	550 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	AEN	Q8WTP8	325 aa	Known RBP	10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	CHTF18	Q8WVB6	975 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	RIT1	Q92963	219 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	RELT	Q969Z4	430 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	CCDC126	Q96EE4	140 aa		10.89	□□□□□ -0.67
PSMC3-205	ENST00000528362	ART5	Q96L15	291 aa		10.89	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms