RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ESRRBO95718 433 aa24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 NME2P22392 152 aa24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 MST1P26927 711 aa24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 HMOX2P30519 316 aa24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 RNF4P78317 190 aa24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 PMP22Q01453 160 aa24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 GALNT1Q10472 559 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 TBL3Q12788 808 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 CSTF3Q12996 717 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 TCHHL1Q5QJ38 904 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 SSC4DQ8WTU2 575 aa24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 TEX10Q9NXF1 929 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 USP9YO00507 2555 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-217ENST00000527644 CCDC151A5D8V7 595 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 PGRMC2O15173 223 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 OR10H2O60403 315 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 OR2J2O76002 312 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 GALNSP34059 522 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 MAPK12P53778 367 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 DNAJB13P59910 316 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 NDUFAF5Q5TEU4 345 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 DGAT2L6Q6ZPD8 337 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 ZGRF1Q86YA3 2104 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 GPALPP1Q8IXQ4 340 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 C4orf33Q8N1A6 199 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 CYP4Z2PQ8N1L4 340 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 GBP7Q8N8V2 638 aaPredicted RBP24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 CCDC63Q8NA47 563 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 UCN3Q969E3 161 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 CAVIN3Q969G5 261 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 HBEGFQ99075 208 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 LIN28AQ9H9Z2 209 aaKnown RBP24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 SLC5A6Q9Y289 635 aa24.48■■□□□ 1.51
TSPAN4-217ENST00000527644 IGKV3-11P04433 115 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 SLC35E2P0CK97 266 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 CPA3P15088 417 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 PIK3R1P27986 724 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 HK2P52789 917 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 NAGLUP54802 743 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 IFFO1Q0D2I5 559 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 SPRED3Q2MJR0 410 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 FAM219BQ5XKK7 198 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 C16orf47Q6ZP98 133 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 AGAP11Q8TF27 550 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 FBXL20Q96IG2 436 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 ROPN1BQ9BZX4 212 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 ROPN1Q9HAT0 212 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 MID1IP1Q9NPA3 183 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 OXSMQ9NWU1 459 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 OSGIN2Q9Y236 505 aa24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 KLF13Q9Y2Y9 288 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 V9GYY5 206 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-217ENST00000527644 H3BQF6 201 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 WWP2O00308 870 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 CFAP157Q5JU67 520 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 GFRALQ6UXV0 394 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 C1orf52Q8N6N3 182 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 OR4K14Q8NGD5 310 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 CHTF18Q8WVB6 975 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 ASB15Q8WXK1 588 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 RIT1Q92963 219 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 FRMD6Q96NE9 622 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 PSMG3-AS1Q96PY0 264 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 RASL10BQ96S79 203 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 SEC14L3Q9UDX4 400 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 ERRFI1Q9UJM3 462 aaPredicted RBP24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 MID2Q9UJV3 735 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 PCDHA9Q9Y5H5 950 aa24.46■■□□□ 1.51
TSPAN4-217ENST00000527644 SPTAN1Q13813 2472 aaKnown RBP24.45■■□□□ 1.51
TSPAN4-217ENST00000527644 A8MVJ9 347 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 TRA2BP62995 288 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 ALDH6A1Q02252 535 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 SRSF11Q05519 484 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 FRMD7Q6ZUT3 714 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 NUBPLQ8TB37 319 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 CNPPD1Q9BV87 410 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 C12orf65Q9H3J6 166 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 TIMMDC1Q9NPL8 285 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 HPF1Q9NWY4 346 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 MKS1Q9NXB0 559 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 LGALS13Q9UHV8 139 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 ERVK-11Q9UQG0 969 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 TIMM22Q9Y584 194 aa24.45■■□□□ 1.5
TSPAN4-217ENST00000527644 C1orf226A1L170 272 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 SERTM1A2A2V5 107 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 KLRC4-KLRK1H3BQV0 150 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 HRKO00198 91 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 UBFD1O14562 309 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 UNC5CO95185 931 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 HTR6P50406 440 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 KCNK10P57789 538 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 ERVK-8P63133 956 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 ZNF267Q14586 743 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 MPEG1Q2M385 716 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 ERCC6LQ2NKX8 1250 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 C4orf17Q53FE4 359 aa24.44■■□□□ 1.5
TSPAN4-217ENST00000527644 KRTCAP3Q53RY4 240 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms