RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 KBTBD2Q8IY47 623 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 OR14A16Q8NHC5 309 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 M1APQ8TC57 530 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 KLHL29Q96CT2 875 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 PPP1R36Q96LQ0 422 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 DGAT2Q96PD7 388 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 ZNF160Q9HCG1 818 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 MIEF1Q9NQG6 463 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 UTS2RQ9UKP6 389 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 CPMP14384 443 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 CSNK2A2P19784 350 aaPredicted RBP19.4■□□□□ 0.7
CD44-222ENST00000526025 EPHA3P29320 983 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 ALDH9A1P49189 494 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 SLC26A5P58743 744 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 PDE7AQ13946 482 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 SPRED3Q2MJR0 410 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 R3HCC1LQ7Z5L2 792 aaKnown RBP19.4■□□□□ 0.7
CD44-222ENST00000526025 MMP21Q8N119 569 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 LIX1Q8N485 282 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 MORN4Q8NDC4 146 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 NFAM1Q8NET5 270 aaPredicted RBP19.4■□□□□ 0.7
CD44-222ENST00000526025 CEP70Q8NHQ1 597 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 TTC9Q92623 222 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 UCN3Q969E3 161 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 WBP1Q96G27 269 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 RBM18Q96H35 190 aaKnown RBP19.4■□□□□ 0.7
CD44-222ENST00000526025 EGLN2Q96KS0 407 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 ZNF681Q96N22 645 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 TSSK3Q96PN8 268 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 C1orf50Q9BV19 199 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 ADNPQ9H2P0 1102 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 REEP4Q9H6H4 257 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 MMP25Q9NPA2 562 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 SLC35C2Q9NQQ7 365 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 GIMAP4Q9NUV9 329 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 TUBD1Q9UJT1 453 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 EXO1Q9UQ84 846 aaKnown RBP19.4■□□□□ 0.7
CD44-222ENST00000526025 ZNF780BQ9Y6R6 833 aa19.4■□□□□ 0.7
CD44-222ENST00000526025 IGHV3-20A0A0C4DH32 117 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 DYRK3O43781 588 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 IFNA16P05015 189 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 ATP1B1P05026 303 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 PORP16435 677 aaPredicted RBP19.39■□□□□ 0.69
CD44-222ENST00000526025 HPCAL1P37235 193 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 XKP51811 444 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 ID2Q02363 134 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 VWA5B1Q5TIE3 1220 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 OR4N5Q8IXE1 308 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 GALNT16Q8N428 558 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 B3GNT7Q8NFL0 401 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 CDC26Q8NHZ8 85 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 PTPMT1Q8WUK0 201 aaPredicted RBP19.39■□□□□ 0.69
CD44-222ENST00000526025 ART5Q96L15 291 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 WDR55Q9H6Y2 383 aaPredicted RBP19.39■□□□□ 0.69
CD44-222ENST00000526025 PNO1Q9NRX1 252 aaKnown RBP19.39■□□□□ 0.69
CD44-222ENST00000526025 PCDHGA9Q9Y5G4 932 aaKnown RBP19.39■□□□□ 0.69
CD44-222ENST00000526025 CLCA3PQ9Y6N3 262 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 CPAMD8Q8IZJ3 1885 aa19.39■□□□□ 0.69
CD44-222ENST00000526025 WASHC1A8K0Z3 465 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 ERVH48-1M5A8F1 160 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 OR10H2O60403 315 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 G6PDP11413 515 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 PRPS1L1P21108 318 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 GPR143P51810 404 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 CLDN8P56748 225 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 Q0VFX4 171 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 SLC9B1Q4ZJI4 515 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 ACAD11Q709F0 780 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 TICAM1Q8IUC6 712 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 EXTL1Q92935 676 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 CNRIP1Q96F85 164 aaPredicted RBP19.38■□□□□ 0.69
CD44-222ENST00000526025 CCDC28BQ9BUN5 200 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 TRIM55Q9BYV6 548 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 SEMA4CQ9C0C4 833 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 LHPPQ9H008 270 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 C5AR2Q9P296 337 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 BAIAP2L1Q9UHR4 511 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 ATP6V1HQ9UI12 483 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 G3BP2Q9UN86 482 aaKnown RBP19.38■□□□□ 0.69
CD44-222ENST00000526025 ENTPD4Q9Y227 616 aa19.38■□□□□ 0.69
CD44-222ENST00000526025 C17orf105B2RV13 164 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 SCAMP2O15127 329 aaKnown RBP19.37■□□□□ 0.69
CD44-222ENST00000526025 DIAPH2O60879 1101 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 ERAL1O75616 437 aaKnown RBP19.37■□□□□ 0.69
CD44-222ENST00000526025 SLITRK5O94991 958 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 AQP5P55064 265 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 POLE2P56282 527 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 CHAF1BQ13112 559 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 MYBPC3Q14896 1274 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 PTGR1Q14914 329 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 BTBD16Q32M84 506 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 LINC00303Q3SY05 128 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 IRAK1BP1Q5VVH5 260 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 RIMKLAQ8IXN7 391 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 LRRC25Q8N386 305 aaPredicted RBP19.37■□□□□ 0.69
CD44-222ENST00000526025 NATD1Q8N6N6 113 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 ELP5Q8TE02 316 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 VMP1Q96GC9 406 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 BRINP2Q9C0B6 783 aa19.37■□□□□ 0.69
CD44-222ENST00000526025 CXorf21Q9HAI6 301 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms