RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ADAM29Q9UKF5 820 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 TCFL5Q9UL49 500 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 MKL2Q9ULH7 1088 aa6.08□□□□□ -1.44
CD44-214ENST00000525211 COPG1Q9Y678 874 aaKnown RBP6.08□□□□□ -1.44
CD44-214ENST00000525211 MAP1BP46821 2468 aaKnown RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 ZZEF1O43149 2961 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 NUP210LQ5VU65 1888 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 PTPRQQ9UMZ3 2332 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 GNG14A0A1W2PPG7 69 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 URADA6NGE7 173 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 IDSB3KWA1 339 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 MAN1A2O60476 641 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 SNX3O60493 162 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 SCN2BO60939 215 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 SEC24DO94855 1032 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 TGDSO95455 350 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CHEK2O96017 543 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 ALBP02768 609 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CLPSP04118 112 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 KLK3P07288 261 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 HBQ1P09105 142 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 RAB40ALP0C0E4 278 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 NR2F6P10588 404 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 AGXTP21549 392 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 OTX2P32243 289 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 ALDH9A1P49189 494 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 EMP2P54851 167 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 PCBP4P57723 403 aaKnown RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 ERVK-8P63133 956 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 IGLV3-21P80748 117 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 TLE3Q04726 772 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 MGAT2Q10469 447 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 ATP1A4Q13733 1029 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 PDE7AQ13946 482 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 UBAP2LQ14157 1087 aaKnown RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 PCOLCEQ15113 449 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 TUBB8Q3ZCM7 444 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 MINDY4Q4G0A6 757 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 SPIN4Q56A73 249 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CPZQ66K79 652 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 OGFOD2Q6N063 350 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 SLC48A1Q6P1K1 146 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 TMEM205Q6UW68 189 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 C16orf47Q6ZP98 133 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 MED25Q71SY5 747 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 ERMP1Q7Z2K6 904 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 ZNF551Q7Z340 670 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 ANKRD37Q7Z713 158 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 PIGWQ7Z7B1 504 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 LSRQ86X29 649 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 PROSER1Q86XN7 944 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 TICAM1Q8IUC6 712 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CLECL1Q8IZS7 167 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CLEC4FQ8N1N0 589 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 KIF2BQ8N4N8 673 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 IL22RA1Q8N6P7 574 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 PLPP5Q8NEB5 264 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 SRFBP1Q8NEF9 429 aaKnown RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 NFAM1Q8NET5 270 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 ADCY4Q8NFM4 1077 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 OR2Y1Q8NGV0 311 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 PTPMT1Q8WUK0 201 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 KCNE4Q8WWG9 221 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 ZCCHC14Q8WYQ9 949 aaKnown RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 FKBP10Q96AY3 582 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 EXOSC8Q96B26 276 aaKnown RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 PPP3R2Q96LZ3 170 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 PTCHD1Q96NR3 888 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CNTNAP3BQ96NU0 1288 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CCT7Q99832 543 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CRB3Q9BUF7 120 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CCDC28BQ9BUN5 200 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 NPLQ9BXD5 320 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 ALOXE3Q9BYJ1 711 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 TRIM55Q9BYV6 548 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CNTNAP3Q9BZ76 1288 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 RPF2Q9H7B2 306 aaKnown RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 COPS7BQ9H9Q2 264 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 GPN2Q9H9Y4 310 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 MKKSQ9NPJ1 570 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 PRTFDC1Q9NRG1 225 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 SLC6A13Q9NSD5 602 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 ASIC5Q9NY37 505 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 ATP6V1HQ9UI12 483 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 CDC14AQ9UNH5 594 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 PCDHGA6Q9Y5G7 932 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 GPC6Q9Y625 555 aaPredicted RBP6.07□□□□□ -1.44
CD44-214ENST00000525211 MGAQ8IWI9 3026 aa6.07□□□□□ -1.44
CD44-214ENST00000525211 LOC102723996A0A087X1L8 192 aa6.06□□□□□ -1.44
CD44-214ENST00000525211 TCRBV16S1A1N1A0A5B0 115 aa6.06□□□□□ -1.44
CD44-214ENST00000525211 CDC14CA4D256 554 aa6.06□□□□□ -1.44
CD44-214ENST00000525211 TRPC5OSA6NMA1 111 aa6.06□□□□□ -1.44
CD44-214ENST00000525211 C9J4A7 227 aa6.06□□□□□ -1.44
CD44-214ENST00000525211 SLCO1B7G3V0H7 640 aa6.06□□□□□ -1.44
CD44-214ENST00000525211 K7EM74 188 aa6.06□□□□□ -1.44
CD44-214ENST00000525211 SCAMP2O15127 329 aaKnown RBP6.06□□□□□ -1.44
CD44-214ENST00000525211 UBDO15205 165 aa6.06□□□□□ -1.44
CD44-214ENST00000525211 ZNF354AO60765 605 aaPredicted RBP6.06□□□□□ -1.44
CD44-214ENST00000525211 CTNSO60931 367 aa6.06□□□□□ -1.44
CD44-214ENST00000525211 ERAL1O75616 437 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms