RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 HERVK_113P63132 956 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 ERVK-8P63133 956 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 TFF3Q07654 80 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 GTF2H2Q13888 395 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 PCBP2Q15366 365 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 CPSF6Q16630 551 aaKnown RBP eCLIP10.91□□□□□ -0.661e-6■□□□□ 9.5
CLNS1A-202ENST00000525064 ZNF791Q3KP31 576 aaPredicted RBP10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 LIPJQ5W064 366 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 GTF2H2CQ6P1K8 395 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 GK5Q6ZS86 529 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 FAM47EQ6ZV65 393 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 TRILQ7L0X0 811 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 GPR180Q86V85 440 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 ZCCHC7Q8N3Z6 543 aaKnown RBP10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 GOLM1Q8NBJ4 401 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 WDR20Q8TBZ3 569 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 ANP32BQ92688 251 aaKnown RBP10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 RGMAQ96B86 450 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 CDK15Q96Q40 435 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 SMC6Q96SB8 1091 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 TREX2Q9BQ50 279 aaPredicted RBP10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 FAM173AQ9BQD7 235 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 LRRC1Q9BTT6 524 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 CNPPD1Q9BV87 410 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 ERVK-6Q9BXR3 956 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 PROK2Q9HC23 129 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 SH2D2AQ9NP31 389 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 SACM1LQ9NTJ5 587 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 COQ3Q9NZJ6 369 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 COPS7AQ9UBW8 275 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 ERVK-19Q9WJR5 959 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 RNF11Q9Y3C5 154 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 ASB4Q9Y574 426 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 ANGPTL3Q9Y5C1 460 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 MED12Q93074 2177 aa10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 ANKRD17O75179 2603 aaKnown RBP10.91□□□□□ -0.66
CLNS1A-202ENST00000525064 A0A1W2PR48 441 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 SYCE1LA8MT33 242 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 H0YIV9 168 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 OR7A17O14581 309 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 PROM1O43490 865 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 KLHL2O95198 593 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 AIFM1O95831 613 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 IGHG3P01860 377 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 IGFBP2P18065 325 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 PIK3CBP42338 1070 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 ALDH18A1P54886 795 aaKnown RBP10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 PLIN5Q00G26 463 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 PMPCAQ10713 525 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 ACAP2Q15057 778 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 FAM83EQ2M2I3 478 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 MPEG1Q2M385 716 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 GXYLT1Q4G148 440 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 PRAMEF20Q5VT98 475 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 RTL6Q6ICC9 239 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 C8orf74Q6P047 294 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 OPN5Q6U736 354 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 RPS27LQ71UM5 84 aaKnown RBP10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 SLC22A16Q86VW1 577 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 EID3Q8N140 333 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 FAM109AQ8N4B1 249 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 OR52B6Q8NGF0 335 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 OR5L2Q8NGL0 311 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 NUBPLQ8TB37 319 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 C14orf79Q96F83 325 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 FBXL20Q96IG2 436 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 NSUN5Q96P11 429 aaKnown RBP10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 SPOCK3Q9BQ16 436 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 VPS11Q9H270 941 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 IPPKQ9H8X2 491 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 ACTR8Q9H981 624 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 IL1RL2Q9HB29 575 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 ZBTB26Q9HCK0 441 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 TEX10Q9NXF1 929 aaPredicted RBP10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 SPRR3Q9UBC9 169 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 ADGRE2Q9UHX3 823 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 PHF11Q9UIL8 331 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 ITGB1BP2Q9UKP3 347 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 TSC22D4Q9Y3Q8 395 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 PCDHGA11Q9Y5H2 935 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 FAM215AQ9Y5M1 114 aa10.9□□□□□ -0.66
CLNS1A-202ENST00000525064 A0A1B0GVC2 190 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 ATP6AP2A0A1C7CYW4 349 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 LRRC3CA6NJW4 275 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 ATP6AP2O75787 350 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 TOXO94900 526 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 P04436 131 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 CT62P0C5K7 136 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 RFPL3SP0C7P2 107 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 FAM58BPP0C7Q3 252 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 NR2F6P10588 404 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 COX7A2P14406 83 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 TYK2P29597 1187 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 SSTR2P30874 369 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 CHRNB4P30926 498 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 MAGEA12P43365 314 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 SERPINB8P50452 374 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 TLE4Q04727 773 aa10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 ZNF267Q14586 743 aaPredicted RBP10.89□□□□□ -0.67
CLNS1A-202ENST00000525064 EBPQ15125 230 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms