RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 FBXL20Q96IG2 436 aa12.7□□□□□ -0.38
CSTF3-206ENST00000524827 PBKQ96KB5 322 aa12.7□□□□□ -0.38
CSTF3-206ENST00000524827 DGAT2Q96PD7 388 aa12.7□□□□□ -0.38
CSTF3-206ENST00000524827 WDR83Q9BRX9 315 aaKnown RBP12.7□□□□□ -0.38
CSTF3-206ENST00000524827 DOHHQ9BU89 302 aa12.7□□□□□ -0.38
CSTF3-206ENST00000524827 DNAJC11Q9NVH1 559 aa12.7□□□□□ -0.38
CSTF3-206ENST00000524827 WWOXQ9NZC7 414 aa12.7□□□□□ -0.38
CSTF3-206ENST00000524827 ASIC3Q9UHC3 531 aa12.7□□□□□ -0.38
CSTF3-206ENST00000524827 CNOT11Q9UKZ1 510 aaKnown RBP12.7□□□□□ -0.38
CSTF3-206ENST00000524827 SPACA6W5XKT8 324 aa12.7□□□□□ -0.38
CSTF3-206ENST00000524827 GOLGA6L6A8MZA4 724 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 EEF1E1-BLOC1S5C9J1V9 151 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 PGRMC1O00264 195 aaKnown RBP12.69□□□□□ -0.38
CSTF3-206ENST00000524827 TAPBPO15533 448 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 EEF1E1O43324 174 aaKnown RBP12.69□□□□□ -0.38
CSTF3-206ENST00000524827 SCELO95171 688 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 C1QAP02745 245 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 HEXAP06865 529 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 CD53P19397 219 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 HIST1H1TP22492 207 aaPredicted RBP12.69□□□□□ -0.38
CSTF3-206ENST00000524827 CPN2P22792 545 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 ELK3P41970 407 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 MSH2P43246 934 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 AGFG1P52594 562 aaKnown RBP12.69□□□□□ -0.38
CSTF3-206ENST00000524827 SORDQ00796 357 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 TGFBIQ15582 683 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 NSUN5P2Q63ZY6 315 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 STEAP4Q687X5 459 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 GAS2L3Q86XJ1 694 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 DND1Q8IYX4 353 aaKnown RBP12.69□□□□□ -0.38
CSTF3-206ENST00000524827 SNX31Q8N9S9 440 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 SRFBP1Q8NEF9 429 aaKnown RBP12.69□□□□□ -0.38
CSTF3-206ENST00000524827 DOK4Q8TEW6 326 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 PPWD1Q96BP3 646 aaKnown RBP12.69□□□□□ -0.38
CSTF3-206ENST00000524827 WDR34Q96EX3 536 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 ART5Q96L15 291 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 ZNF597Q96LX8 424 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 DOCK7Q96N67 2140 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 GAL3ST4Q96RP7 486 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 NAP1L3Q99457 506 aaPredicted RBP12.69□□□□□ -0.38
CSTF3-206ENST00000524827 TIMP4Q99727 224 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 YIPF4Q9BSR8 244 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 TBCDQ9BTW9 1192 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 EFCAB11Q9BUY7 163 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 MS4A8Q9BY19 250 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 PRDM14Q9GZV8 571 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 EPB41L4BQ9H329 900 aa12.69□□□□□ -0.38
CSTF3-206ENST00000524827 ARID1AO14497 2285 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 A0A1W2PPR1 153 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 DYRK3O43781 588 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 SH3BGRLO75368 114 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 TRIM3O75382 744 aaPredicted RBP12.68□□□□□ -0.38
CSTF3-206ENST00000524827 GOSR1O95249 250 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 HRGP04196 525 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 SERPINB3P29508 390 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 GGT5P36269 586 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 SSR2P43308 183 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 HSPA7P48741 367 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 HERVK_113P63132 956 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 ERVK-8P63133 956 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 NKX6-1P78426 367 aaPredicted RBP12.68□□□□□ -0.38
CSTF3-206ENST00000524827 PLIN5Q00G26 463 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 POU4F3Q15319 338 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 NTRK2Q16620 822 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 PDK4Q16654 411 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 PM20D2Q8IYS1 436 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 TCAIMQ8N3R3 496 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 BBOF1Q8ND07 529 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 C7orf57Q8NEG2 295 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 ZNF473Q8WTR7 871 aaKnown RBP12.68□□□□□ -0.38
CSTF3-206ENST00000524827 ESAMQ96AP7 390 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 ERVK-6Q9BXR3 956 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 WWTR1Q9GZV5 400 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 ZNF395Q9H8N7 513 aaPredicted RBP12.68□□□□□ -0.38
CSTF3-206ENST00000524827 CNOT10Q9H9A5 744 aaKnown RBP12.68□□□□□ -0.38
CSTF3-206ENST00000524827 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.68□□□□□ -0.38
CSTF3-206ENST00000524827 BEX4Q9NWD9 120 aaPredicted RBP12.68□□□□□ -0.38
CSTF3-206ENST00000524827 CAMK2AQ9UQM7 478 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 ERVK-19Q9WJR5 959 aa12.68□□□□□ -0.38
CSTF3-206ENST00000524827 MED12Q93074 2177 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 MBD3L4A6NDZ8 208 aaPredicted RBP12.67□□□□□ -0.38
CSTF3-206ENST00000524827 MBD3L3A6NE82 208 aaPredicted RBP12.67□□□□□ -0.38
CSTF3-206ENST00000524827 MBD3L5A6NJ08 208 aaPredicted RBP12.67□□□□□ -0.38
CSTF3-206ENST00000524827 STK16O75716 305 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 TRAPPC6AO75865 159 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 EPORP19235 508 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 CTSSP25774 331 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 CDK9P50750 372 aaKnown RBP12.67□□□□□ -0.38
CSTF3-206ENST00000524827 FRG1Q14331 258 aaKnown RBP12.67□□□□□ -0.38
CSTF3-206ENST00000524827 EBPQ15125 230 aaKnown RBP12.67□□□□□ -0.38
CSTF3-206ENST00000524827 AP5B1Q2VPB7 878 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 TMEM35AQ53FP2 167 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 PAGE2BQ5JRK9 111 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 TBCELQ5QJ74 424 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 SHEQ5VZ18 495 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 BICRALQ6AI39 1079 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 VASNQ6EMK4 673 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 RNF111Q6ZNA4 994 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 SLC29A4Q7RTT9 530 aa12.67□□□□□ -0.38
CSTF3-206ENST00000524827 CXorf67Q86X51 503 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms