RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PRSS36Q5K4E3 855 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 AGAP6Q5VW22 663 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PARM1Q6UWI2 310 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 C16orf62Q7Z3J2 963 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 DENND1CQ8IV53 801 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 KATNAL2Q8IYT4 538 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 LINC00301Q8NCQ3 95 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 FAM83FQ8NEG4 500 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 OR6F1Q8NGZ6 308 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 OR4K15Q8NH41 348 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 SETD6Q8TBK2 473 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 FAM174AQ8TBP5 190 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 FGF14Q92915 247 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 SMARCD2Q92925 531 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PSMG2Q969U7 264 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PPP1R14AQ96A00 147 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 MCUR1Q96AQ8 359 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 TLCD1Q96CP7 247 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 L3HYPDHQ96EM0 354 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 SENP8Q96LD8 212 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 FCRL3Q96P31 734 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 AGAP4Q96P64 663 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 EBNA1BP2Q99848 306 aaKnown RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 MGME1Q9BQP7 344 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 CXCL16Q9H2A7 254 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 MIXL1Q9H2W2 232 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PRDM13Q9H4Q3 707 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ANKRD19PQ9H560 264 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 CNTD2Q9H8S5 307 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 CCNB1IP1Q9NPC3 277 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PNO1Q9NRX1 252 aaKnown RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ZCCHC3Q9NUD5 404 aaKnown RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 RNF14Q9UBS8 474 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM59LQ9UK28 342 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 FBXO4Q9UKT5 387 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 GRIP1Q9Y3R0 1128 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 YIPF1Q9Y548 306 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 CACNA1IQ9P0X4 2223 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PCM1Q15154 2024 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 USP34Q70CQ2 3546 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 OBSL1O75147 1896 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MGAT4DA6NG13 374 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MYMKA6NI61 221 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 I3L521 148 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 DDX3XO00571 662 aaKnown RBP eCLIP7.18□□□□□ -1.264e-13■■■■□ 23.7
HDAC3-216ENST00000523088 NEMP1O14524 444 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SCAMP2O15127 329 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 RGS5O15539 181 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TBX19O60806 448 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SCN2BO60939 215 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 USP12O75317 370 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SPAG7O75391 227 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 LRCH4O75427 683 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TSPAN12O95859 305 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 GSRP00390 522 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 ADAP00813 363 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MT-ND2P03891 347 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 PCCBP05166 539 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 CHRNGP07510 517 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MYBP10242 640 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 NQO2P16083 231 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MAGP20916 626 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 CNR1P21554 472 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 GLDCP23378 1020 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 ATP5A1P25705 553 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 RPS9P46781 194 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 ACOT2P49753 483 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 IDH3GP51553 393 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 PRKXP51817 358 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 ERVK-25P63136 954 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 NTHL1P78549 312 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MRPS11P82912 194 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MYL7Q01449 175 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TNFRSF9Q07011 255 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 BST2Q10589 180 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MAMLD1Q13495 774 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 AQP6Q13520 282 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF267Q14586 743 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SLC1A5Q15758 541 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 GUK1Q16774 197 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 KNOP1Q1ED39 458 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 C5orf64Q2M2E5 130 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TRMT5Q32P41 509 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SEZ6Q53EL9 994 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 TDRD10Q5VZ19 366 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 OR6B2Q6IFH4 312 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MRM1Q6IN84 353 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 SLC39A4Q6P5W5 647 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 LRFN4Q6PJG9 635 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 FAM151BQ6UXP7 276 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF782Q6ZMW2 699 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 BBS12Q6ZW61 710 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 OVCH2Q7RTZ1 564 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 LRRC70Q7Z2Q7 622 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 VN1R5Q7Z5H4 357 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 MRPL52Q86TS9 123 aaKnown RBP7.18□□□□□ -1.26
HDAC3-216ENST00000523088 AMIGO1Q86WK6 493 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 PLD3Q8IV08 490 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 KLHL7Q8IXQ5 586 aa7.18□□□□□ -1.26
HDAC3-216ENST00000523088 YAF2Q8IY57 180 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms